C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00000Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122122-ENSG00000188706 CGP 9606 X:129779979-129843909
GeneTranscriptPositionBiotype
ENSG00000122122 (SASH3)
SAM and SH3 domain containing 3
ENST00000356892 (SASH3-001) 129779984-129795201 protein_coding
ENST00000476532 (SASH3-002) 129779979-129788150 processed_transcript
ENSG00000188706 (ZDHHC9)
zinc finger, DHHC-type containing 9
ENST00000357166 (ZDHHC9-001) 129803288-129843884 protein_coding
ENST00000371064 (ZDHHC9-005) 129805329-129843460 protein_coding
ENST00000406492 (ZDHHC9-004) 129814771-129843909 protein_coding
ENST00000433917 (ZDHHC9-002) 129811447-129841824 protein_coding
ENST00000491039 (ZDHHC9-003) 129822888-129823788 processed_transcript
ENSG00000240143 (RP4-753P9.3)
ENST00000432513 (RP4-753P9.3-001) 129794994-129796963 3prime_overlapping_ncrna
ENSG00000266440 (AL359542.1)
ENST00000582964 (AL359542.1-201) 129821822-129821922 miRNA
ENSG00000275070 (Metazoa_SRP)
Metazoan signal recognition particle RNA
ENST00000614439 (Metazoa_SRP.1-307) 129796491-129796783 misc_RNA
CIL_00000Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031101-ENSMUSG00000036985 CGP 10090 X:48146436-48208878
GeneTranscriptPositionBiotype
ENSMUSG00000031101 (Sash3)
SAM and SH3 domain containing 3
ENSMUST00000033427 (Sash3-001) 48146436-48161565 protein_coding
ENSMUSG00000036985 (Zdhhc9)
zinc finger, DHHC domain containing 9
ENSMUST00000037960 (Zdhhc9-001) 48171969-48208687 protein_coding
ENSMUST00000088935 (Zdhhc9-002) 48171969-48208878 protein_coding
ENSMUST00000123054 (Zdhhc9-003) 48181694-48208665 retained_intron
ENSMUST00000127440 (Zdhhc9-004) 48190044-48208602 retained_intron
ENSMUST00000132652 (Zdhhc9-005) 48201730-48208328 processed_transcript
ENSMUST00000149416 (Zdhhc9-006) 48206668-48208658 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000Z_0001ENSG00000122122ENST00000356892ENST00000476532ENSG00000188706ENST00000357166ENST00000371064ENST00000406492ENST00000433917ENST00000491039ENSG00000240143ENST00000432513ENSG00000266440ENST00000582964ENSG00000275070ENST00000614439CIL_00000Z_0002ENSMUSG00000031101ENSMUST00000033427ENSMUSG00000036985ENSMUST00000037960ENSMUST00000088935ENSMUST00000123054ENSMUST00000127440ENSMUST00000132652ENSMUST00000149416
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000Z_0001ENSG00000122122ENST00000356892ENSG00000188706ENST00000357166ENST00000371064ENST00000406492ENSG00000240143ENST00000432513ENSG00000266440ENST00000582964ENSG00000275070ENST00000614439CIL_00000Z_0002ENSMUSG00000031101ENSMUST00000033427ENSMUSG00000036985ENSMUST00000037960ENSMUST00000088935ENSMUST00000123054
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122122 ENST00000356892 3.585±0.00 34.870±0.00 0.238±0.00 1.410±0.83 2.636±0.00 0.875±0.60 0.695±0.62 2.077±0.57 1.387±0.28 9.603±0.00 0.139±0.11 1.809±0.78 7.363±1.23 1.046±0.67
ENST00000476532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188706 ENST00000357166 6.846±0.00 1.929±0.00 N/A 10.993±3.55 1.838±0.11 2.404±1.47 1.906±0.00 2.781±0.00 3.559±0.00 3.898±2.27 N/A 5.029±1.15 5.761±1.60 1.961±0.00
ENST00000371064 24.113±0.00 4.317±0.00 N/A 11.117±6.26 4.942±0.67 7.379±3.38 2.285±1.82 6.750±3.55 7.527±4.35 7.485±6.48 3.888±0.00 10.763±6.99 10.290±1.40 3.020±0.99
ENST00000406492 N/A N/A N/A N/A N/A N/A 1.033±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000433917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240143 ENST00000432513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 2.105±0.00 N/A N/A
ENSG00000266440 ENST00000582964 N/A 0.570±0.00 N/A N/A 0.304±0.00 N/A 0.274±0.00 0.300±0.00 0.275±0.00 N/A N/A 2.674±0.00 0.699±0.00 1.823±1.30
ENSG00000275070 ENST00000614439 0.690±0.00 1.688±0.00 N/A N/A 0.610±0.00 N/A 0.189±0.00 0.953±0.00 N/A 0.445±0.30 0.058±0.00 0.152±0.02 0.268±0.00 0.120±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031101 ENSMUST00000033427 2.504±0.82 0.801±0.21 0.912±0.15 0.354±0.06 24.123±6.66 2.127±0.72 0.764±0.30 1.488±0.94 2.606±2.24 7.558±0.30 0.455±0.82 1.461±0.39 0.681±0.19 0.346±0.16
ENSMUSG00000036985 ENSMUST00000037960 9.039±0.51 4.133±0.40 15.855±1.12 11.636±5.37 7.141±1.20 11.792±0.50 9.091±0.49 28.764±1.58 21.492±12.25 12.218±1.73 2.567±0.54 7.382±2.60 14.265±7.31 3.688±1.96
ENSMUST00000088935 N/A N/A N/A 1.037±0.00 6.796±0.00 N/A N/A N/A 2.535±0.84 N/A 0.954±0.34 4.573±3.05 4.470±2.94 0.385±0.31
ENSMUST00000123054 4.962±1.65 3.975±0.40 N/A N/A 3.429±0.34 6.169±0.75 N/A 10.535±0.26 10.575±0.75 5.238±1.07 N/A 3.262±0.76 N/A N/A
ENSMUST00000127440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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