C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAM and SH3 domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033427 Sash3-001 ENSMUSG00000031101 10090 + X:48146436-48161565 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033427
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033427 2.504±0.82 0.801±0.21 0.912±0.15 0.354±0.06 24.123±6.66 2.127±0.72 0.764±0.30 1.488±0.94 2.606±2.24 7.558±0.30 0.455±0.82 1.461±0.39 0.681±0.19 0.346±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000A5 CIL_0000A5_0002 CGP X:48108725-48161565
CIL_00000Z CIL_00000Z_0002 CGP X:48146436-48208878

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002639 IMP positive regulation of immunoglobulin production
GO:0002726 IMP positive regulation of T cell cytokine production
GO:0002821 IMP positive regulation of adaptive immune response
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0030890 IMP positive regulation of B cell proliferation
GO:0032729 IMP positive regulation of interferon-gamma production
GO:0032733 IMP positive regulation of interleukin-10 production
GO:0032743 IMP positive regulation of interleukin-2 production
GO:0032753 IMP positive regulation of interleukin-4 production
GO:0032760 IMP positive regulation of tumor necrosis factor production
GO:0042102 IMP positive regulation of T cell proliferation
GO:0043372 IMP positive regulation of CD4-positive, alpha-beta T cell differentiation
GO:0046622 IMP positive regulation of organ growth
GO:0048873 IMP homeostasis of number of cells within a tissue
GO:0051251 IMP positive regulation of lymphocyte activation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356892 SASH3-001 protein_coding Homo_sapiens 0 1467
ENST00000476532 SASH3-002 processed_transcript Homo_sapiens 0 228

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