C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAM and SH3 domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356892 SASH3-001 ENSG00000122122 9606 + X:129779984-129795201 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356892
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356892 3.585±0.00 34.870±0.00 0.238±0.00 1.410±0.83 2.636±0.00 0.875±0.60 0.695±0.62 2.077±0.57 1.387±0.28 9.603±0.00 0.139±0.11 1.809±0.78 7.363±1.23 1.046±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000A5 CIL_0000A5_0001 CGP X:129738974-129795201
CIL_00000Z CIL_00000Z_0001 CGP X:129779979-129843909

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002639 IEA positive regulation of immunoglobulin production
GO:0002726 IEA positive regulation of T cell cytokine production
GO:0002821 IEA positive regulation of adaptive immune response
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0030890 IEA positive regulation of B cell proliferation
GO:0032729 IEA positive regulation of interferon-gamma production
GO:0032733 IEA positive regulation of interleukin-10 production
GO:0032743 IEA positive regulation of interleukin-2 production
GO:0032753 IEA positive regulation of interleukin-4 production
GO:0032760 IEA positive regulation of tumor necrosis factor production
GO:0042102 IEA positive regulation of T cell proliferation
GO:0043372 IEA positive regulation of CD4-positive, alpha-beta T cell differentiation
GO:0046622 IEA positive regulation of organ growth
GO:0048873 IEA homeostasis of number of cells within a tissue
GO:0051251 IEA positive regulation of lymphocyte activation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033427 Sash3-001 protein_coding Mus_musculus 0 1467

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