C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392722 RP3-514P16.1-001 ENSG00000237682 9606 - X:101537485-101539276 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLungOvaryPlacentaTestisENST00000392722
Transcript ID Adipose Bladder Brain Breast Colon Lung Ovary Placenta Testis
ENST00000392722 0.006±0.00 0.124±0.00 0.060±0.00 0.061±0.00 0.037±0.00 0.074±0.00 0.016±0.00 0.027±0.00 0.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000028 CIL_000028_0001 CGP X:101418287-101554700

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108249 Prkci-001 protein_coding Mus_musculus 0 2093
ENSDART00000015723 prkci-001 protein_coding Danio_rerio 0 651
ENSMUST00000123971 Prkci-003 processed_transcript Mus_musculus 0 610
ENSMUST00000136086 Prkci-005 protein_coding Mus_musculus 0 444
ENSMUST00000130706 Prkci-004 retained_intron Mus_musculus 0 357
ENSMUST00000030922 Prkcz-001 protein_coding Mus_musculus 0 283
ENSMUST00000103178 Prkcz-002 protein_coding Mus_musculus 0 283

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