C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00002A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038703-ENSDARG00000077728 CGP 7955 13:23157710-23191978
GeneTranscriptPositionBiotype
ENSDARG00000038703 (hkdc1)
hexokinase domain containing 1 		ENSDART00000056523 (hkdc1-001) 23157710-23172015 protein_coding
ENSDARG00000077728 (supv3l1)
suppressor of var1, 3-like 1 (S. cerevisiae) 		ENSDART00000111774 (supv3l1-001) 23177797-23191978 protein_coding
ENSDART00000125257 (supv3l1-002) 23191202-23191936 retained_intron

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00002A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020080-ENSMUSG00000020079 CGP 10090 10:62383137-62449738
GeneTranscriptPositionBiotype
ENSMUSG00000020079 (Supv3l1)
suppressor of var1, 3-like 1 (S. cerevisiae) 		ENSMUST00000020273 (Supv3l1-001) 62429209-62449738 protein_coding
ENSMUST00000159042 (Supv3l1-004) 62429443-62430968 retained_intron
ENSMUST00000161830 (Supv3l1-005) 62429340-62430621 retained_intron
ENSMUST00000161941 (Supv3l1-003) 62432359-62433127 processed_transcript
ENSMUST00000162023 (Supv3l1-002) 62429255-62449683 nonsense_mediated_decay
ENSMUSG00000020080 (Hkdc1)
hexokinase domain containing 1 		ENSMUST00000020277 (Hkdc1-001) 62383137-62422491 protein_coding
ENSMUST00000159454 (Hkdc1-003) 62409789-62411804 retained_intron
ENSMUST00000159493 (Hkdc1-004) 62395159-62400361 retained_intron
ENSMUST00000159579 (Hkdc1-002) 62416383-62422408 retained_intron
ENSMUSG00000097129 (4930507D05Rik)
RIKEN cDNA 4930507D05 gene 		ENSMUST00000181110 (4930507D05Rik-201) 62449489-62451322 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002A_0001ENSDARG00000038703ENSDART00000056523ENSDARG00000077728ENSDART00000111774ENSDART00000125257CIL_00002A_0002ENSMUSG00000020079ENSMUST00000020273ENSMUST00000159042ENSMUST00000161830ENSMUST00000161941ENSMUST00000162023ENSMUSG00000020080ENSMUST00000020277ENSMUST00000159454ENSMUST00000159493ENSMUST00000159579ENSMUSG00000097129ENSMUST00000181110
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002A_0001ENSDARG00000038703ENSDART00000056523ENSDARG00000077728ENSDART00000111774CIL_00002A_0002ENSMUSG00000020079ENSMUST00000020273ENSMUST00000159042ENSMUST00000162023ENSMUSG00000020080ENSMUST00000020277ENSMUST00000159493ENSMUSG00000097129ENSMUST00000181110
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038703 ENSDART00000056523 N/A N/A N/A 0.985±0.23 N/A N/A 0.346±0.09 1.434±1.84 0.236±0.00 N/A 0.081±0.00 N/A N/A N/A
ENSDARG00000077728 ENSDART00000111774 N/A N/A N/A 2.215±0.76 N/A N/A 4.291±2.18 8.925±1.27 2.270±0.00 N/A 2.711±0.00 N/A N/A N/A
ENSDART00000125257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020079 ENSMUST00000020273 3.318±1.03 3.613±1.60 2.127±0.01 6.443±3.64 3.303±0.55 2.828±0.75 8.365±2.51 5.746±0.89 4.595±2.39 1.076±0.42 4.429±0.84 3.647±1.29 7.765±3.82 4.169±1.95
ENSMUST00000159042 N/A N/A N/A 1.059±0.00 N/A N/A N/A N/A 3.178±0.00 N/A N/A 5.542±0.51 N/A N/A
ENSMUST00000161830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162023 3.299±0.71 2.816±1.09 1.718±0.25 2.039±1.03 1.942±0.68 1.199±0.23 2.181±0.27 2.564±0.68 1.830±0.59 2.078±0.32 0.882±0.03 2.453±0.97 3.885±2.58 1.947±0.24
ENSMUSG00000020080 ENSMUST00000020277 0.058±0.03 0.037±0.02 0.025±0.00 0.168±0.16 0.013±0.00 4.523±1.37 N/A 0.433±0.11 2.128±1.54 1.518±0.22 N/A 0.039±0.02 10.932±10.53 0.018±0.01
ENSMUST00000159454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159493 N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A 0.264±0.00 0.584±0.00 0.092±0.03
ENSMUST00000159579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097129 ENSMUST00000181110 2.144±0.00 21.644±1.79 N/A N/A 2.476±0.70 2.360±0.88 N/A 1.902±0.00 1.658±0.36 1.337±0.25 N/A 4.398±3.04 N/A 2.059±0.00

Loading