C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00002Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069363-ENSDARG00000015854 CGP 7955 13:29627820-29644933
GeneTranscriptPositionBiotype
ENSDARG00000015854 (chat)
choline acetyltransferase 		ENSDART00000024225 (chat-201) 29632961-29644423 protein_coding
ENSDART00000150228 (chat-001) 29632961-29644933 protein_coding
ENSDARG00000069363 (C13H10orf53)
chromosome 10 open reading frame 53 		ENSDART00000100877 (C13H10orf53-001) 29627820-29630136 protein_coding
ENSDARG00000079249 (OGDHL)
oxoglutarate dehydrogenase-like 		ENSDART00000113009 (OGDHL-201) 29579839-29628476 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00002Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000072473-ENSMUSG00000021919 CGP 10090 14:32376502-32465909
GeneTranscriptPositionBiotype
ENSMUSG00000021919 (Chat)
choline acetyltransferase 		ENSMUST00000070125 (Chat-201) 32408203-32465909 protein_coding
ENSMUSG00000072473 (1700024G13Rik)
RIKEN cDNA 1700024G13 gene 		ENSMUST00000100723 (1700024G13Rik-201) 32376502-32388373 protein_coding
ENSMUSG00000097794 (Gm2990)
predicted gene 2990 		ENSMUST00000180662 (Gm2990-201) 32465042-32483539 lincRNA
ENSMUSG00000100241 (Slc18a3)
solute carrier family 18 (vesicular monoamine), member 3 		ENSMUST00000191501 (Slc18a3-001) 32462438-32464850 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002Q_0001ENSDARG00000015854ENSDART00000024225ENSDART00000150228ENSDARG00000069363ENSDART00000100877ENSDARG00000079249ENSDART00000113009CIL_00002Q_0002ENSMUSG00000021919ENSMUST00000070125ENSMUSG00000072473ENSMUST00000100723ENSMUSG00000097794ENSMUST00000180662ENSMUSG00000100241ENSMUST00000191501
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002Q_0001ENSDARG00000015854ENSDART00000024225ENSDART00000150228ENSDARG00000069363ENSDART00000100877ENSDARG00000079249ENSDART00000113009CIL_00002Q_0002ENSMUSG00000021919ENSMUST00000070125ENSMUSG00000072473ENSMUST00000100723ENSMUSG00000097794ENSMUST00000180662ENSMUSG00000100241ENSMUST00000191501
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015854 ENSDART00000024225 N/A N/A N/A N/A N/A N/A 0.245±0.28 0.091±0.00 0.022±0.00 N/A 0.326±0.00 N/A N/A N/A
ENSDART00000150228 N/A N/A N/A 4.616±0.00 N/A N/A 0.230±0.00 1.088±0.60 N/A N/A N/A N/A N/A N/A
ENSDARG00000069363 ENSDART00000100877 N/A N/A N/A 7.486±2.54 N/A N/A 0.048±0.02 0.812±0.18 0.036±0.00 N/A 0.206±0.00 N/A N/A N/A
ENSDARG00000079249 ENSDART00000113009 N/A N/A N/A 7.608±5.80 N/A N/A 0.069±0.06 0.103±0.00 0.034±0.00 N/A 0.482±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021919 ENSMUST00000070125 0.024±0.00 0.016±0.00 0.036±0.00 0.472±0.34 0.099±0.01 0.337±0.18 0.033±0.01 N/A 0.009±0.00 0.038±0.00 N/A N/A N/A 0.031±0.02
ENSMUSG00000072473 ENSMUST00000100723 N/A N/A N/A 0.324±0.13 N/A N/A 0.335±0.19 N/A N/A 9.262±0.76 N/A 10.750±3.81 0.256±0.03 164.203±52.50
ENSMUSG00000097794 ENSMUST00000180662 N/A N/A N/A 0.243±0.13 N/A 0.070±0.00 0.066±0.00 0.035±0.00 0.009±0.00 N/A N/A N/A N/A 0.114±0.07
ENSMUSG00000100241 ENSMUST00000191501 0.010±0.00 0.024±0.01 0.103±0.02 1.119±0.91 N/A 1.132±0.24 0.167±0.02 N/A 0.007±0.00 0.023±0.00 N/A N/A 0.021±0.02 1.114±0.55

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