C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: choline acetyltransferase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021919 Chat 10090 - 14:32408203-32465909 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070125 Chat-201 32408203-32465909 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungTestisENSMUST00000070125
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Testis
ENSMUST00000070125 0.024±0.00 0.016±0.00 0.036±0.00 0.472±0.34 0.099±0.01 0.337±0.18 0.033±0.01 0.009±0.00 0.038±0.00 0.031±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084A CIL_00084A_0002 VISTA 14:32298253-32899721
CIL_00002Q CIL_00002Q_0002 CGP 14:32376502-32465909
CIL_0006F1 CIL_0006F1_0003 CGP 14:32408203-32465909

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004102 IMP choline O-acetyltransferase activity
GO:0005739 IDA mitochondrion
GO:0007268 IMP synaptic transmission
GO:0007274 IMP neuromuscular synaptic transmission
GO:0007517 IMP muscle organ development
GO:0007529 IMP establishment of synaptic specificity at neuromuscular junction
GO:0007622 IMP rhythmic behavior
GO:0007628 IMP adult walking behavior
GO:0008152 IEA metabolic process
GO:0016358 IMP dendrite development
GO:0030182 IMP neuron differentiation
GO:0030424 IDA axon
GO:0043005 IDA neuron projection
GO:0043025 IDA neuronal cell body
GO:0043179 IMP rhythmic excitation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015854 chat choline acetyltransferase protein_coding Danio_rerio
ENSG00000070748 CHAT choline O-acetyltransferase protein_coding Homo_sapiens

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