C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00002Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000013834-ENSDARG00000089893 CGP 7955 22:41997100-42085285
GeneTranscriptPositionBiotype
ENSDARG00000013834 (arhgef3)
Rho guanine nucleotide exchange factor (GEF) 3 		ENSDART00000025482 (arhgef3-001) 42023346-42038480 protein_coding
ENSDART00000130305 (arhgef3-201) 41997100-42038405 protein_coding
ENSDART00000149541 (arhgef3-002) 42013508-42035257 processed_transcript
ENSDARG00000089893 (CABZ01044611.1)
Uncharacterized protein 		ENSDART00000129848 (CABZ01044611.1-201) 42053115-42085285 protein_coding
CIL_00002Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021895-ENSMUSG00000040651 CGP 10090 14:27238039-27483552
GeneTranscriptPositionBiotype
ENSMUSG00000021895 (Arhgef3)
Rho guanine nucleotide exchange factor (GEF) 3 		ENSMUST00000049206 (Arhgef3-201) 27238039-27403904 protein_coding
ENSMUSG00000040651 (Fam208a)
family with sequence similarity 208, member A 		ENSMUST00000022450 (Fam208a-201) 27428847-27483552 protein_coding
ENSMUSG00000046753 (Ccdc66)
coiled-coil domain containing 66 		ENSMUST00000050480 (Ccdc66-201) 27482412-27508460 protein_coding
ENSMUSG00000093034 (Gm23633)
predicted gene, 23633 		ENSMUST00000175293 (Gm23633-201) 27380732-27380850 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002Z_0001ENSDARG00000013834ENSDART00000025482ENSDART00000130305ENSDART00000149541ENSDARG00000089893ENSDART00000129848CIL_00002Z_0002ENSMUSG00000021895ENSMUST00000049206ENSMUSG00000040651ENSMUST00000022450ENSMUSG00000046753ENSMUST00000050480ENSMUSG00000093034ENSMUST00000175293
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002Z_0001ENSDARG00000013834ENSDART00000025482ENSDARG00000089893ENSDART00000129848CIL_00002Z_0002ENSMUSG00000021895ENSMUST00000049206ENSMUSG00000040651ENSMUST00000022450ENSMUSG00000046753ENSMUST00000050480ENSMUSG00000093034ENSMUST00000175293
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013834 ENSDART00000025482 N/A N/A N/A N/A N/A N/A 0.473±0.11 N/A 0.097±0.00 N/A N/A N/A N/A N/A
ENSDART00000130305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000089893 ENSDART00000129848 N/A N/A N/A 0.155±0.04 N/A N/A N/A 1.422±0.00 0.255±0.00 N/A 0.487±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021895 ENSMUST00000049206 8.854±2.40 6.000±1.83 13.316±5.83 1.075±0.59 5.162±2.86 6.105±1.73 6.068±0.64 6.931±1.19 2.549±2.41 30.966±1.56 1.774±0.56 4.222±1.45 8.945±4.35 3.257±1.52
ENSMUSG00000040651 ENSMUST00000022450 2.287±1.29 4.256±1.72 8.755±0.90 6.045±3.41 3.492±1.81 2.315±0.43 0.698±0.23 1.149±0.54 2.239±1.08 5.014±0.23 0.342±0.08 4.363±1.38 3.921±0.72 1.775±0.76
ENSMUSG00000046753 ENSMUST00000050480 1.438±0.41 N/A 5.958±1.11 7.346±2.41 1.262±0.34 1.178±0.06 1.338±0.12 1.284±0.10 2.290±1.55 N/A 2.177±0.47 4.779±4.55 6.405±4.10 4.829±0.27
ENSMUSG00000093034 ENSMUST00000175293 N/A N/A N/A N/A 1240.800±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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