C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00003R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000212916-ENSG00000135778 CGP 9606 1:232804892-232983882
GeneTranscriptPositionBiotype
ENSG00000135749 (PCNXL2)
pecanex-like 2 (Drosophila)
ENST00000258229 (PCNXL2-002) 232983435-233295713 protein_coding
ENST00000324142 (PCNXL2-003) 233201492-233252687 retained_intron
ENST00000344698 (PCNXL2-001) 232984136-233058518 protein_coding
ENST00000429988 (PCNXL2-023) 233025263-233054689 retained_intron
ENST00000430153 (PCNXL2-201) 233135013-233258152 protein_coding
ENST00000462233 (PCNXL2-007) 232984136-233200191 nonsense_mediated_decay
ENST00000462762 (PCNXL2-016) 232984137-232985552 processed_transcript
ENST00000467336 (PCNXL2-008) 233139809-233180996 processed_transcript
ENST00000475463 (PCNXL2-005) 233065461-233258152 nonsense_mediated_decay
ENST00000484041 (PCNXL2-013) 233089851-233135188 retained_intron
ENST00000484347 (PCNXL2-011) 233095406-233160307 protein_coding
ENST00000486012 (PCNXL2-012) 233095657-233177835 nonsense_mediated_decay
ENST00000488780 (PCNXL2-010) 233134784-233218087 protein_coding
ENST00000490102 (PCNXL2-022) 233090162-233139836 nonsense_mediated_decay
ENST00000496510 (PCNXL2-020) 233139826-233181102 processed_transcript
ENST00000496675 (PCNXL2-015) 232984135-232985884 processed_transcript
ENST00000497623 (PCNXL2-014) 232998323-232999627 retained_intron
ENST00000498302 (PCNXL2-009) 233160247-233179174 retained_intron
ENST00000517808 (PCNXL2-018) 233199020-233218089 nonsense_mediated_decay
ENST00000518351 (PCNXL2-019) 233198967-233227269 protein_coding
ENST00000519530 (PCNXL2-017) 233208659-233227347 retained_intron
ENST00000520463 (PCNXL2-021) 233125904-233160425 processed_transcript
ENST00000522067 (PCNXL2-024) 233017073-233025632 retained_intron
ENSG00000212916 (MAP10)
microtubule-associated protein 10
ENST00000418460 (MAP10-001) 232804892-232808407 protein_coding
ENSG00000232175 (RP4-659I19.1)
ENST00000435206 (RP4-659I19.1-001) 232917235-232918018 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_00003R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050930-ENSMUSG00000031851 CGP 10090 8:125669818-125748235
GeneTranscriptPositionBiotype
ENSMUSG00000031851 (Ntpcr)
nucleoside-triphosphatase, cancer-related
ENSMUST00000034313 (Ntpcr-001) 125734203-125748235 protein_coding
ENSMUST00000065135 (Ntpcr-002) 125734238-125739179 protein_coding
ENSMUST00000123554 (Ntpcr-006) 125734233-125736329 retained_intron
ENSMUST00000138656 (Ntpcr-004) 125733090-125748034 processed_transcript
ENSMUST00000143504 (Ntpcr-008) 125730028-125747809 protein_coding
ENSMUST00000146055 (Ntpcr-003) 125729963-125745299 processed_transcript
ENSMUST00000151172 (Ntpcr-005) 125730032-125738136 processed_transcript
ENSMUST00000152189 (Ntpcr-007) 125735835-125747997 protein_coding
ENSMUSG00000050930 (Map10)
microtubule-associated protein 10
ENSMUST00000053078 (Map10-001) 125669818-125673359 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00003R_0001ENSG00000135749ENST00000258229ENST00000324142ENST00000344698ENST00000429988ENST00000430153ENST00000462233ENST00000462762ENST00000467336ENST00000475463ENST00000484041ENST00000484347ENST00000486012ENST00000488780ENST00000490102ENST00000496510ENST00000496675ENST00000497623ENST00000498302ENST00000517808ENST00000518351ENST00000519530ENST00000520463ENST00000522067ENSG00000212916ENST00000418460ENSG00000232175ENST00000435206CIL_00003R_0002ENSMUSG00000031851ENSMUST00000034313ENSMUST00000065135ENSMUST00000123554ENSMUST00000138656ENSMUST00000143504ENSMUST00000146055ENSMUST00000151172ENSMUST00000152189ENSMUSG00000050930ENSMUST00000053078
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00003R_0001ENSG00000135749ENST00000258229ENST00000344698ENSG00000212916ENST00000418460ENSG00000232175ENST00000435206CIL_00003R_0002ENSMUSG00000031851ENSMUST00000034313ENSMUST00000065135ENSMUST00000123554ENSMUST00000138656ENSMUST00000143504ENSMUST00000146055ENSMUST00000152189ENSMUSG00000050930ENSMUST00000053078
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135749 ENST00000258229 0.901±0.00 1.393±0.00 0.664±0.00 5.176±2.12 1.082±0.00 1.100±0.00 N/A 1.138±0.00 N/A 0.941±0.00 N/A 3.146±1.18 N/A 1.523±0.00
ENST00000324142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000344698 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.587±0.00 N/A N/A N/A N/A
ENST00000429988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212916 ENST00000418460 0.180±0.00 0.612±0.00 0.025±0.00 0.819±0.02 0.365±0.10 0.218±0.08 0.379±0.15 0.706±0.22 0.355±0.15 0.307±0.21 0.463±0.35 0.617±0.19 0.211±0.08 1.312±0.20
ENSG00000232175 ENST00000435206 N/A 0.037±0.00 N/A N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A 0.041±0.00 0.060±0.01 0.077±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031851 ENSMUST00000034313 4.856±0.56 5.774±2.15 13.549±1.65 7.574±2.31 2.656±0.64 3.376±1.27 3.070±0.44 3.653±0.52 3.782±1.77 1.842±0.68 5.763±0.38 4.924±2.99 2.732±0.96 21.557±4.05
ENSMUST00000065135 2.024±0.12 N/A 2.576±0.05 0.835±0.11 1.722±0.00 N/A 1.000±0.22 1.732±0.16 1.307±0.42 1.057±0.04 0.762±0.05 1.449±0.60 0.781±0.49 N/A
ENSMUST00000123554 N/A 10.412±1.33 N/A N/A 5.012±0.00 8.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138656 N/A N/A N/A N/A 2.526±0.62 3.887±0.93 N/A N/A 1.250±0.00 1.774±0.56 N/A 4.741±0.99 N/A N/A
ENSMUST00000143504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.343±0.00 N/A N/A
ENSMUST00000146055 N/A N/A N/A N/A 5.679±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152189 8.175±2.17 11.335±3.54 5.143±0.00 3.346±1.06 6.721±0.81 10.627±2.23 2.686±0.62 5.905±1.24 3.005±0.83 4.814±1.93 N/A 18.401±4.51 1.832±0.26 24.110±7.30
ENSMUSG00000050930 ENSMUST00000053078 1.010±0.50 3.010±0.51 1.376±0.10 1.496±0.57 1.036±0.48 1.328±0.15 0.823±0.12 1.323±0.35 0.189±0.12 1.643±0.41 0.690±0.05 2.875±1.37 0.931±0.33 7.445±2.56

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