C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pecanex-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258229 PCNXL2-002 ENSG00000135749 9606 - 1:232983435-233295713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLungOvaryTestisENST00000258229
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Lung Ovary Testis
ENST00000258229 0.901±0.00 1.393±0.00 0.664±0.00 5.176±2.12 1.082±0.00 1.100±0.00 1.138±0.00 0.941±0.00 3.146±1.18 1.523±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003R CIL_00003R_0001 CGP 1:232804892-232983882
CIL_0001OO CIL_0001OO_0001 CGP 1:232950605-233295713
CIL_0006KA CIL_0006KA_0001 CGP 1:232983435-233385148

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047239 Pcnxl2-002 protein_coding Mus_musculus 0 4087
ENSMUST00000120589 Pcnxl2-003 retained_intron Mus_musculus 0 3003
ENSMUST00000119305 Pcnxl2-004 retained_intron Mus_musculus 0 1866
ENSMUST00000131127 Pcnxl2-001 protein_coding Mus_musculus 0 1288
ENSMUST00000187772 Pcnxl2-007 processed_transcript Mus_musculus 0 217

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