C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00004G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188243-ENSG00000118939 CGP 9606 13:75525219-75606020
GeneTranscriptPositionBiotype
ENSG00000118939 (UCHL3)
ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 		ENST00000377595 (UCHL3-001) 75549791-75605933 protein_coding
ENST00000419068 (UCHL3-003) 75566710-75605949 protein_coding
ENST00000471792 (UCHL3-002) 75549483-75594990 processed_transcript
ENST00000606347 (UCHL3-005) 75569123-75605930 processed_transcript
ENST00000607339 (UCHL3-004) 75604527-75605933 processed_transcript
ENST00000618773 (UCHL3-201) 75549480-75606020 protein_coding
ENSG00000188243 (COMMD6)
COMM domain containing 6 		ENST00000355801 (COMMD6-005) 75526436-75537841 protein_coding
ENST00000377612 (COMMD6-006) 75526436-75538802 nonsense_mediated_decay
ENST00000377615 (COMMD6-001) 75525219-75538802 protein_coding
ENST00000377619 (COMMD6-003) 75526436-75537618 protein_coding
ENST00000406936 (COMMD6-201) 75525219-75537805 protein_coding
ENST00000460675 (COMMD6-011) 75526436-75549428 processed_transcript
ENST00000464050 (COMMD6-008) 75529709-75537844 retained_intron
ENST00000471682 (COMMD6-012) 75530114-75549439 processed_transcript
ENST00000477377 (COMMD6-010) 75529824-75537841 retained_intron
ENST00000483290 (COMMD6-009) 75526436-75530504 retained_intron
ENST00000486516 (COMMD6-007) 75526436-75537826 processed_transcript
ENST00000497707 (COMMD6-004) 75526436-75537841 processed_transcript
ENSG00000261553 (RP11-29G8.3)
 ENST00000563635 (RP11-29G8.3-001) 75549773-75807120 processed_transcript
ENST00000570285 (RP11-29G8.3-002) 75566832-75623320 processed_transcript
CIL_00004G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000075486-ENSMUSG00000022111 CGP 10090 14:101633766-101696124
GeneTranscriptPositionBiotype
ENSMUSG00000022111 (Uchl3)
ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 		ENSMUST00000002289 (Uchl3-201) 101653967-101696124 protein_coding
ENSMUSG00000075486 (Commd6)
COMM domain containing 6 		ENSMUST00000100339 (Commd6-001) 101633766-101640686 protein_coding
ENSMUST00000131022 (Commd6-002) 101640056-101640686 retained_intron
ENSMUST00000168587 (Commd6-201) 101633767-101640471 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004G_0001ENSG00000118939ENST00000377595ENST00000419068ENST00000471792ENST00000606347ENST00000607339ENST00000618773ENSG00000188243ENST00000355801ENST00000377612ENST00000377615ENST00000377619ENST00000406936ENST00000460675ENST00000464050ENST00000471682ENST00000477377ENST00000483290ENST00000486516ENST00000497707ENSG00000261553ENST00000563635ENST00000570285CIL_00004G_0002ENSMUSG00000022111ENSMUST00000002289ENSMUSG00000075486ENSMUST00000100339ENSMUST00000131022ENSMUST00000168587
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004G_0001ENSG00000118939ENST00000377595ENST00000419068ENST00000471792ENSG00000188243ENST00000355801ENST00000377612ENST00000377615ENST00000377619ENST00000406936ENST00000460675ENST00000483290ENSG00000261553ENST00000563635CIL_00004G_0002ENSMUSG00000022111ENSMUST00000002289ENSMUSG00000075486ENSMUST00000100339ENSMUST00000131022ENSMUST00000168587
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118939 ENST00000377595 8.402±0.00 12.808±0.00 N/A N/A 18.193±0.00 8.444±0.00 N/A 24.662±0.00 8.816±2.24 N/A 18.119±0.00 17.835±7.00 20.940±3.62 24.641±6.93
ENST00000419068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.638±0.00
ENST00000471792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.837±0.00 37.186±0.00
ENST00000606347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188243 ENST00000355801 22.584±0.00 29.405±0.00 N/A 8.938±1.88 22.016±16.17 12.869±7.96 18.392±9.90 N/A 17.648±3.37 30.615±15.84 11.925±3.17 63.014±32.63 27.963±7.62 21.440±0.78
ENST00000377612 N/A 16.310±0.00 N/A 4.417±0.00 14.511±0.00 55.270±0.00 N/A 33.369±0.00 5.779±0.00 56.835±0.00 N/A 49.058±0.00 N/A 28.546±0.00
ENST00000377615 N/A N/A 1.021±0.00 2.946±0.00 1.810±0.00 0.486±0.00 0.254±0.00 1.730±0.00 3.194±0.00 N/A N/A 1.556±0.00 N/A N/A
ENST00000377619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.208±0.00 N/A 11.310±0.00
ENST00000406936 N/A N/A N/A 1.380±0.00 N/A N/A N/A 2.955±0.00 N/A 0.571±0.00 N/A 2.359±0.00 N/A N/A
ENST00000460675 21.037±0.00 18.887±0.00 N/A 14.988±0.00 15.814±8.33 21.269±15.78 14.133±11.38 22.431±13.35 14.822±0.49 N/A 7.758±0.00 76.867±62.04 30.051±6.12 22.769±12.34
ENST00000464050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483290 N/A N/A 1.514±0.00 N/A 2.582±0.00 N/A N/A N/A N/A 4.743±0.00 N/A N/A N/A N/A
ENST00000486516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261553 ENST00000563635 N/A N/A N/A N/A 2.380±0.00 3.903±0.00 N/A N/A N/A N/A N/A 9.986±0.00 N/A N/A
ENST00000570285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022111 ENSMUST00000002289 6.482±3.14 10.942±1.12 22.355±3.47 51.089±15.80 7.196±2.37 12.686±5.32 10.980±3.38 9.326±3.70 22.019±15.97 8.003±1.29 13.363±1.14 20.732±7.28 44.666±6.70 72.988±19.52
ENSMUSG00000075486 ENSMUST00000100339 11.005±4.74 11.745±1.55 15.997±5.28 5.937±3.13 10.005±3.67 10.829±0.97 3.896±1.53 18.525±1.94 12.592±5.10 8.175±1.28 1.966±0.87 9.811±2.65 8.069±4.34 4.875±0.36
ENSMUST00000131022 3.484±0.00 8.775±3.80 N/A N/A 4.779±0.89 3.856±0.62 N/A N/A N/A 2.700±0.06 N/A 4.339±1.43 N/A 2.026±0.00
ENSMUST00000168587 N/A N/A N/A 4.234±1.10 N/A N/A 1.369±0.21 N/A 3.306±0.74 N/A 1.544±0.39 8.638±3.96 10.872±6.14 1.108±0.00

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