C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: COMM domain containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000075486 Commd6 10090 - 14:101633766-101640686 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100339 Commd6-001 101633766-101640686 protein_coding
  ENSMUST00000131022 Commd6-002 101640056-101640686 retained_intron
  ENSMUST00000168587 Commd6-201 101633767-101640471 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100339ENSMUST00000131022ENSMUST00000168587
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100339 11.005±4.74 11.745±1.55 15.997±5.28 5.937±3.13 10.005±3.67 10.829±0.97 3.896±1.53 18.525±1.94 12.592±5.10 8.175±1.28 1.966±0.87 9.811±2.65 8.069±4.34 4.875±0.36
ENSMUST00000131022 3.484±0.00 8.775±3.80 N/A N/A 4.779±0.89 3.856±0.62 N/A N/A N/A 2.700±0.06 N/A 4.339±1.43 N/A 2.026±0.00
ENSMUST00000168587 N/A N/A N/A 4.234±1.10 N/A N/A 1.369±0.21 N/A 3.306±0.74 N/A 1.544±0.39 8.638±3.96 10.872±6.14 1.108±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004F CIL_00004F_0002 CGP 14:101442360-101640686
CIL_00004G CIL_00004G_0002 CGP 14:101633766-101696124

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0032088 IEA negative regulation of NF-kappaB transcription factor activity
GO:0051059 IEA NF-kappaB binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074204 COMMD6 COMM domain containing 6 protein_coding Danio_rerio
ENSG00000188243 COMMD6 COMM domain containing 6 protein_coding Homo_sapiens

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