C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00004M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157884-ENSG00000171303 CGP 9606 2:26581202-26733420
GeneTranscriptPositionBiotype
ENSG00000157884 (CIB4)
calcium and integrin binding family member 4
ENST00000288861 (CIB4-001) 26581202-26641368 protein_coding
ENST00000403670 (CIB4-002) 26581207-26605563 processed_transcript
ENST00000405346 (CIB4-003) 26581340-26623627 processed_transcript
ENSG00000171303 (KCNK3)
potassium channel, subfamily K, member 3
ENST00000302909 (KCNK3-001) 26692751-26733420 protein_coding
ENST00000620977 (KCNK3-201) 26692690-26729255 protein_coding
ENSG00000225024 (AC015977.5)
ENST00000418887 (AC015977.5-001) 26678219-26678510 processed_pseudogene
ENSG00000225378 (AC015977.6)
ENST00000420852 (AC015977.6-001) 26671254-26674464 antisense
CIL_00004M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053194-ENSMUSG00000049265 CGP 10090 5:30485583-30625270
GeneTranscriptPositionBiotype
ENSMUSG00000049265 (Kcnk3)
potassium channel, subfamily K, member 3
ENSMUST00000066295 (Kcnk3-201) 30588170-30625270 protein_coding
ENSMUSG00000053194 (Cib4)
calcium and integrin binding family member 4
ENSMUST00000065486 (Cib4-001) 30485583-30545836 protein_coding
ENSMUSG00000053214 (Gm9899)
predicted gene 9899
ENSMUST00000065519 (Gm9899-201) 30577467-30578025 pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004M_0001ENSG00000157884ENST00000288861ENST00000403670ENST00000405346ENSG00000171303ENST00000302909ENST00000620977ENSG00000225024ENST00000418887ENSG00000225378ENST00000420852CIL_00004M_0002ENSMUSG00000049265ENSMUST00000066295ENSMUSG00000053194ENSMUST00000065486ENSMUSG00000053214ENSMUST00000065519
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004M_0001ENSG00000157884ENST00000288861ENST00000403670ENST00000405346ENSG00000171303ENST00000302909ENST00000620977ENSG00000225024ENST00000418887ENSG00000225378ENST00000420852CIL_00004M_0002ENSMUSG00000049265ENSMUST00000066295ENSMUSG00000053194ENSMUST00000065486ENSMUSG00000053214ENSMUST00000065519
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157884 ENST00000288861 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A N/A 0.348±0.00 4.145±0.09
ENST00000403670 N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.524±0.23 0.195±0.07 N/A
ENST00000405346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.163±0.10 3.699±0.00
ENSG00000171303 ENST00000302909 0.269±0.00 2.962±0.00 0.095±0.00 0.606±0.00 0.273±0.00 0.713±0.00 0.173±0.15 0.488±0.00 0.136±0.00 14.013±0.00 0.034±0.00 1.408±1.70 8.183±0.00 0.609±0.44
ENST00000620977 N/A N/A N/A N/A 0.554±0.00 N/A 0.524±0.38 N/A 0.339±0.00 N/A 0.251±0.00 5.302±0.00 18.475±6.19 0.121±0.00
ENSG00000225024 ENST00000418887 N/A 0.054±0.00 N/A 0.056±0.00 0.054±0.00 0.051±0.00 N/A 0.054±0.00 N/A N/A 0.143±0.00 0.238±0.00 N/A N/A
ENSG00000225378 ENST00000420852 N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000049265 ENSMUST00000066295 19.471±4.98 1223.962±205.86 10.876±2.38 2.242±0.91 26.194±8.27 5.919±0.36 62.761±10.87 4.589±0.47 0.167±0.13 16.258±4.57 0.097±0.06 34.368±16.31 0.432±0.38 0.301±0.15
ENSMUSG00000053194 ENSMUST00000065486 0.163±0.07 1.823±0.62 0.167±0.04 N/A 0.222±0.10 N/A 0.119±0.06 0.094±0.03 N/A 0.377±0.24 N/A 0.292±0.20 0.084±0.00 29.525±11.55
ENSMUSG00000053214 ENSMUST00000065519 0.325±0.00 6.820±1.13 0.122±0.00 N/A 0.377±0.21 N/A 1.556±0.00 0.125±0.04 0.130±0.08 0.316±0.13 N/A 0.444±0.21 0.047±0.05 0.159±0.06

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