C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel, subfamily K, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302909 KCNK3-001 ENSG00000171303 9606 + 2:26692751-26733420 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302909
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302909 0.269±0.00 2.962±0.00 0.095±0.00 0.606±0.00 0.273±0.00 0.713±0.00 0.173±0.15 0.488±0.00 0.136±0.00 14.013±0.00 0.034±0.00 1.408±1.70 8.183±0.00 0.609±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0001 VISTA 2:26419781-27023232
CIL_00004M CIL_00004M_0001 CGP 2:26581202-26733420
CIL_00004N CIL_00004N_0001 CGP 2:26692690-26781231

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IMP ion channel activity
GO:0005252 IEA open rectifier potassium channel activity
GO:0005267 TAS:IEA potassium channel activity
GO:0005515 IEA protein binding
GO:0005886 IMP plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006813 TAS potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0007420 IEA brain development
GO:0008022 IEA protein C-terminus binding
GO:0016020 IEA membrane
GO:0022841 IDA potassium ion leak channel activity
GO:0034220 IMP ion transmembrane transport
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042493 IEA response to drug
GO:0042803 IEA protein homodimerization activity
GO:0044548 IPI S100 protein binding
GO:0046982 IEA protein heterodimerization activity
GO:0051481 IEA negative regulation of cytosolic calcium ion concentration
GO:0071294 IEA cellular response to zinc ion
GO:0071456 IEA cellular response to hypoxia
GO:0071805 IEA potassium ion transmembrane transport
GO:0090102 IEA cochlea development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066295 Kcnk3-201 protein_coding Mus_musculus 0 1397
ENSDART00000135183 kcnk15-001 protein_coding Danio_rerio 0 472
ENSDART00000074838 KCNK3 (2 of 2)-001 protein_coding Danio_rerio 0 460
ENSDART00000114827 kcnk15-201 protein_coding Danio_rerio 0 427

Loading