C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00006L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035608-ENSDARG00000035607 CGP 7955 5:20709116-20746543
GeneTranscriptPositionBiotype
ENSDARG00000035607 (ankle2)
ankyrin repeat and LEM domain containing 2 		ENSDART00000090521 (ankle2-201) 20727223-20745466 protein_coding
ENSDART00000142531 (ankle2-002) 20736958-20745443 protein_coding
ENSDART00000145210 (ankle2-001) 20726792-20746543 protein_coding
ENSDARG00000035608 (pgam5)
phosphoglycerate mutase family member 5 		ENSDART00000051621 (pgam5-001) 20709116-20719984 protein_coding
CIL_00006L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000247077-ENSG00000176915 CGP 9606 12:132710819-132761888
GeneTranscriptPositionBiotype
ENSG00000176915 (ANKLE2)
ankyrin repeat and LEM domain containing 2 		ENST00000357997 (ANKLE2-001) 132725503-132761888 protein_coding
ENST00000439231 (ANKLE2-010) 132730233-132742558 retained_intron
ENST00000505031 (ANKLE2-011) 132729723-132738907 retained_intron
ENST00000535036 (ANKLE2-006) 132735407-132748020 nonsense_mediated_decay
ENST00000538591 (ANKLE2-009) 132734968-132743254 retained_intron
ENST00000538766 (ANKLE2-008) 132727350-132735123 protein_coding
ENST00000539605 (ANKLE2-002) 132725668-132761813 retained_intron
ENST00000542282 (ANKLE2-014) 132726806-132732210 protein_coding
ENST00000542374 (ANKLE2-012) 132727286-132735439 processed_transcript
ENST00000542657 (ANKLE2-003) 132727133-132732100 protein_coding
ENST00000545623 (ANKLE2-004) 132737043-132751334 retained_intron
ENST00000546061 (ANKLE2-005) 132743239-132749027 processed_transcript
ENSG00000201469 (RNA5SP379)
RNA, 5S ribosomal pseudogene 379 		ENST00000364599 (RNA5SP379-201) 132723945-132724057 rRNA
ENSG00000256108 (RP13-672B3.5)
 ENST00000539323 (RP13-672B3.5-001) 132745156-132745729 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006L_0001ENSDARG00000035607ENSDART00000090521ENSDART00000142531ENSDART00000145210ENSDARG00000035608ENSDART00000051621CIL_00006L_0002ENSG00000176915ENST00000357997ENST00000439231ENST00000505031ENST00000535036ENST00000538591ENST00000538766ENST00000539605ENST00000542282ENST00000542374ENST00000542657ENST00000545623ENST00000546061ENSG00000201469ENST00000364599ENSG00000256108ENST00000539323
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006L_0001ENSDARG00000035607ENSDART00000090521ENSDART00000145210ENSDARG00000035608ENSDART00000051621CIL_00006L_0002ENSG00000176915ENST00000357997ENST00000505031ENST00000538591ENST00000538766ENST00000539605ENST00000542657ENST00000545623ENSG00000201469ENST00000364599ENSG00000256108ENST00000539323
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035607 ENSDART00000090521 N/A N/A N/A 0.405±0.00 N/A N/A 0.542±0.34 1.439±0.72 0.291±0.00 N/A 0.153±0.00 N/A N/A N/A
ENSDART00000142531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145210 N/A N/A N/A 0.222±0.12 N/A N/A 0.644±0.26 0.715±0.17 0.344±0.00 N/A N/A N/A N/A N/A
ENSDARG00000035608 ENSDART00000051621 N/A N/A N/A 16.727±3.38 N/A N/A 22.229±8.66 18.700±5.73 2.609±0.00 N/A 9.504±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000176915 ENST00000357997 11.427±0.00 9.431±0.00 2.096±0.00 4.712±2.46 8.508±4.22 6.404±1.30 4.428±2.92 7.808±4.41 3.582±0.68 9.821±4.91 8.266±6.46 15.397±7.34 9.595±0.46 36.385±3.42
ENST00000439231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505031 N/A N/A 0.808±0.00 N/A 1.802±0.00 2.531±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 94.524±0.00
ENST00000538766 N/A N/A N/A N/A 4.846±0.00 N/A 1.645±0.00 N/A 4.054±0.00 N/A N/A N/A N/A 65.017±0.00
ENST00000539605 N/A 1.746±0.00 N/A N/A N/A N/A N/A N/A N/A 0.886±0.00 N/A N/A N/A N/A
ENST00000542282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.108±0.00 N/A N/A N/A
ENST00000545623 N/A N/A 2.838±0.00 N/A N/A N/A 2.715±0.00 N/A N/A N/A N/A N/A N/A 63.220±0.00
ENST00000546061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201469 ENST00000364599 N/A N/A N/A N/A N/A N/A 1.100±0.00 N/A N/A N/A N/A N/A N/A 1.017±0.00
ENSG00000256108 ENST00000539323 0.033±0.00 0.181±0.00 N/A 0.040±0.00 0.078±0.00 N/A N/A 0.874±0.00 N/A N/A N/A 0.095±0.00 N/A 0.089±0.04

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