C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00006R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059855-ENSDARG00000052907 CGP 7955 5:43392948-43418464
GeneTranscriptPositionBiotype
ENSDARG00000052907 (bcl7a)
B-cell CLL/lymphoma 7A 		ENSDART00000074847 (bcl7a-201) 43411652-43418462 protein_coding
ENSDART00000136439 (bcl7a-001) 43411583-43418464 protein_coding
ENSDARG00000059855 (wdr66)
WD repeat domain 66 		ENSDART00000083665 (wdr66-201) 43394119-43411245 protein_coding
ENSDART00000138393 (wdr66-002) 43399357-43402297 processed_transcript
ENSDART00000147299 (wdr66-001) 43392948-43405836 protein_coding
CIL_00006R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000158023-ENSG00000110987 CGP 9606 12:121917862-122062044
GeneTranscriptPositionBiotype
ENSG00000110801 (PSMD9)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 		ENST00000261817 (PSMD9-001) 121888771-121917863 protein_coding
ENST00000361485 (PSMD9-010) 121914218-121916643 retained_intron
ENST00000535293 (PSMD9-009) 121893817-121916584 nonsense_mediated_decay
ENST00000537407 (PSMD9-002) 121888732-121916644 nonsense_mediated_decay
ENST00000538613 (PSMD9-005) 121888784-121899853 protein_coding
ENST00000540962 (PSMD9-006) 121888762-121916549 nonsense_mediated_decay
ENST00000541212 (PSMD9-003) 121888731-121918297 protein_coding
ENST00000542602 (PSMD9-011) 121888786-121916399 protein_coding
ENST00000543699 (PSMD9-004) 121888845-121916584 nonsense_mediated_decay
ENST00000544254 (PSMD9-007) 121902048-121916615 retained_intron
ENST00000544724 (PSMD9-008) 121897271-121916568 retained_intron
ENSG00000110987 (BCL7A)
B-cell CLL/lymphoma 7A 		ENST00000261822 (BCL7A-002) 122021886-122060905 protein_coding
ENST00000432926 (BCL7A-003) 122021978-122044371 retained_intron
ENST00000538010 (BCL7A-001) 122019422-122062044 protein_coding
ENSG00000158023 (WDR66)
WD repeat domain 66 		ENST00000288912 (WDR66-001) 121917862-122003927 protein_coding
ENST00000397454 (WDR66-003) 121918592-121972069 protein_coding
ENST00000428465 (WDR66-010) 121996886-122003807 retained_intron
ENST00000535257 (WDR66-007) 121952695-121959739 retained_intron
ENST00000540779 (WDR66-002) 121921408-121933655 retained_intron
ENST00000543211 (WDR66-006) 121947669-121959089 retained_intron
ENST00000545752 (WDR66-008) 121961994-121969966 processed_transcript
ENST00000545988 (WDR66-009) 122001704-122003927 processed_transcript
ENST00000546044 (WDR66-005) 121934250-121949211 retained_intron
CIL_00006R_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029442-ENSMUSG00000029438 CGP 10090 5:123252102-123374082
GeneTranscriptPositionBiotype
ENSMUSG00000029438 (Bcl7a)
B cell CLL/lymphoma 7A 		ENSMUST00000031391 (Bcl7a-001) 123344448-123374082 protein_coding
ENSMUST00000117971 (Bcl7a-002) 123344500-123360278 protein_coding
ENSMUST00000120593 (Bcl7a-003) 123343834-123374082 protein_coding
ENSMUSG00000029442 (Wdr66)
WD repeat domain 66 		ENSMUST00000069311 (Wdr66-201) 123293901-123326630 protein_coding
ENSMUST00000121964 (Wdr66-001) 123252102-123327484 protein_coding
ENSMUST00000125979 (Wdr66-004) 123302516-123326649 retained_intron
ENSMUST00000143629 (Wdr66-002) 123271595-123297779 retained_intron
ENSMUST00000150155 (Wdr66-003) 123290009-123326794 nonsense_mediated_decay
ENSMUST00000163092 (Wdr66-202) 123271595-123297777 protein_coding
ENSMUST00000170536 (Wdr66-203) 123271595-123293814 protein_coding
ENSMUSG00000065191 (Gm23458)
predicted gene, 23458 		ENSMUST00000083257 (Gm23458-201) 123360832-123361000 snRNA
ENSMUSG00000094664 (Rpl35a-ps6)
ribosomal protein L35A, pseudogene 6 		ENSMUST00000148282 (Rpl35a-ps6-001) 123255481-123255813 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006R_0001ENSDARG00000052907ENSDART00000074847ENSDART00000136439ENSDARG00000059855ENSDART00000083665ENSDART00000138393ENSDART00000147299CIL_00006R_0002ENSG00000110801ENST00000261817ENST00000361485ENST00000535293ENST00000537407ENST00000538613ENST00000540962ENST00000541212ENST00000542602ENST00000543699ENST00000544254ENST00000544724ENSG00000110987ENST00000261822ENST00000432926ENST00000538010ENSG00000158023ENST00000288912ENST00000397454ENST00000428465ENST00000535257ENST00000540779ENST00000543211ENST00000545752ENST00000545988ENST00000546044CIL_00006R_0003ENSMUSG00000029438ENSMUST00000031391ENSMUST00000117971ENSMUST00000120593ENSMUSG00000029442ENSMUST00000069311ENSMUST00000121964ENSMUST00000125979ENSMUST00000143629ENSMUST00000150155ENSMUST00000163092ENSMUST00000170536ENSMUSG00000065191ENSMUST00000083257ENSMUSG00000094664ENSMUST00000148282
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006R_0001ENSDARG00000052907ENSDART00000074847ENSDART00000136439ENSDARG00000059855ENSDART00000083665ENSDART00000138393ENSDART00000147299CIL_00006R_0002ENSG00000110801ENST00000261817ENST00000361485ENST00000537407ENST00000538613ENST00000540962ENST00000542602ENST00000543699ENST00000544254ENSG00000110987ENST00000261822ENST00000432926ENST00000538010ENSG00000158023ENST00000288912ENST00000397454ENST00000535257ENST00000540779ENST00000545752ENST00000546044CIL_00006R_0003ENSMUSG00000029438ENSMUST00000031391ENSMUST00000117971ENSMUST00000120593ENSMUSG00000029442ENSMUST00000069311ENSMUST00000121964ENSMUST00000143629ENSMUST00000150155ENSMUST00000163092ENSMUST00000170536ENSMUSG00000065191ENSMUST00000083257ENSMUSG00000094664ENSMUST00000148282
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052907 ENSDART00000074847 N/A N/A N/A 10.941±6.07 N/A N/A 1.852±0.53 3.472±0.48 N/A N/A N/A N/A N/A N/A
ENSDART00000136439 N/A N/A N/A 9.089±4.77 N/A N/A 2.343±0.42 3.534±0.00 0.304±0.00 N/A 1.220±0.00 N/A N/A N/A
ENSDARG00000059855 ENSDART00000083665 N/A N/A N/A 0.181±0.05 N/A N/A 0.110±0.00 0.212±0.00 0.034±0.00 N/A 0.050±0.00 N/A N/A N/A
ENSDART00000138393 N/A N/A N/A 0.226±0.01 N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147299 N/A N/A N/A 0.107±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110801 ENST00000261817 N/A N/A 1.529±0.00 4.120±0.00 3.133±0.00 N/A N/A N/A N/A N/A N/A 3.788±0.97 2.161±0.00 N/A
ENST00000361485 N/A N/A N/A N/A N/A 0.894±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537407 7.615±0.00 22.007±0.00 N/A 2.327±0.00 12.082±0.00 7.079±3.38 5.478±4.70 17.762±12.46 6.522±2.87 9.173±0.00 2.215±0.30 25.548±20.44 20.200±7.65 25.712±0.00
ENST00000538613 14.316±0.00 N/A N/A N/A 24.528±0.00 N/A 1.502±0.00 N/A N/A N/A 11.166±0.00 N/A N/A N/A
ENST00000540962 N/A N/A N/A N/A N/A N/A 9.157±0.00 N/A N/A N/A 6.467±0.00 6.405±0.00 N/A N/A
ENST00000541212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542602 9.591±0.00 N/A N/A 5.017±0.00 N/A N/A N/A N/A 4.061±0.00 N/A 5.294±0.00 N/A N/A N/A
ENST00000543699 8.156±0.00 17.623±0.00 N/A 12.392±0.00 6.389±4.24 16.139±0.00 0.582±0.00 26.473±0.00 13.499±0.00 6.657±4.46 4.364±0.00 16.096±1.00 11.968±3.40 N/A
ENST00000544254 N/A N/A N/A N/A N/A N/A 0.408±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000544724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000110987 ENST00000261822 1.857±0.00 0.697±0.00 1.397±0.00 3.990±2.00 1.698±0.45 1.177±0.75 1.697±0.00 2.682±0.00 0.630±0.23 N/A 3.654±2.53 1.432±0.75 0.769±0.15 1.638±0.31
ENST00000432926 N/A N/A N/A N/A N/A N/A N/A 0.507±0.00 1.565±0.00 N/A N/A N/A N/A N/A
ENST00000538010 0.312±0.00 N/A N/A 2.908±0.00 0.886±0.74 N/A 0.875±0.00 3.400±0.00 0.631±0.24 N/A 2.274±0.00 0.469±0.00 N/A 0.774±0.00
ENSG00000158023 ENST00000288912 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.281±0.00 N/A 3.303±0.00 N/A 13.647±1.55
ENST00000397454 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.355±0.00 N/A N/A N/A 6.009±0.00
ENST00000428465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A N/A N/A
ENST00000540779 N/A N/A 0.605±0.00 N/A N/A N/A N/A N/A N/A 0.769±0.00 N/A N/A N/A N/A
ENST00000543211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.979±0.00
ENST00000545988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546044 N/A N/A N/A N/A N/A N/A N/A 5.501±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029438 ENSMUST00000031391 2.681±1.21 3.382±0.26 5.836±0.54 17.158±2.10 3.053±1.33 2.865±1.01 2.418±0.66 10.782±1.90 3.206±1.81 4.214±1.00 5.195±0.88 4.473±1.47 0.926±0.57 0.268±0.15
ENSMUST00000117971 0.798±0.37 0.913±0.15 1.232±0.09 2.675±0.06 1.153±0.23 0.515±0.06 0.505±0.09 2.496±0.14 0.807±0.32 1.393±0.09 0.563±0.00 1.435±0.41 0.191±0.11 0.091±0.05
ENSMUST00000120593 N/A N/A N/A N/A N/A N/A N/A 2.079±0.00 N/A N/A N/A N/A N/A 0.092±0.00
ENSMUSG00000029442 ENSMUST00000069311 N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A 0.469±0.01 6.554±1.13 1.749±0.93 24.934±0.00
ENSMUST00000121964 1.312±0.34 0.195±0.10 0.537±0.06 0.332±0.10 0.549±0.26 0.094±0.03 0.183±0.05 0.498±0.16 0.062±0.05 2.769±0.48 0.171±0.09 1.495±0.69 0.497±0.30 8.666±5.24
ENSMUST00000125979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143629 N/A 0.083±0.01 N/A N/A N/A 0.091±0.00 N/A N/A 0.036±0.00 N/A N/A 0.397±0.00 N/A N/A
ENSMUST00000150155 1.731±0.00 N/A 0.946±0.00 0.376±0.00 N/A 0.320±0.04 N/A 0.786±0.08 0.166±0.02 N/A 0.304±0.16 3.581±0.30 N/A N/A
ENSMUST00000163092 0.312±0.00 0.087±0.01 N/A N/A N/A 0.093±0.00 N/A N/A 0.039±0.00 N/A N/A 0.407±0.00 N/A N/A
ENSMUST00000170536 0.958±0.40 0.210±0.13 0.451±0.01 0.441±0.00 0.477±0.21 0.166±0.06 0.161±0.00 0.272±0.06 0.080±0.03 1.368±0.19 0.140±0.03 1.002±0.47 0.395±0.34 3.724±0.79
ENSMUSG00000065191 ENSMUST00000083257 N/A 8.201±0.00 5.332±1.31 6.425±2.83 N/A 22.773±0.00 N/A 10.810±0.00 3.831±1.97 N/A 1.399±0.00 22.511±1.22 N/A N/A
ENSMUSG00000094664 ENSMUST00000148282 N/A N/A N/A 3.689±0.00 N/A N/A N/A N/A 19.366±0.00 N/A N/A N/A N/A N/A

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