C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arrestin 3, retinal (X-arrestin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307959 ARR3-002 ENSG00000120500 9606 + X:70268352-70281840 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonOvaryTestisENST00000307959
Transcript ID Adipose Adrenal Breast Colon Ovary Testis
ENST00000307959 0.077±0.00 0.023±0.00 0.074±0.00 0.078±0.00 0.055±0.00 0.074±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008M CIL_00008M_0001 CGP X:70258170-70281840

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001750 IEA photoreceptor outer segment
GO:0001917 IDA photoreceptor inner segment
GO:0001932 IEA regulation of protein phosphorylation
GO:0002046 IEA opsin binding
GO:0005515 IPI protein binding
GO:0005737 TAS cytoplasm
GO:0006897 IEA endocytosis
GO:0007165 IEA signal transduction
GO:0007601 IEA visual perception
GO:0045202 IEA synapse
GO:0051219 IEA phosphoprotein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113769 Arr3-001 protein_coding Mus_musculus 0 1194
ENSMUST00000131906 Arr3-002 retained_intron Mus_musculus 0 822
ENSMUST00000141676 Arr3-005 retained_intron Mus_musculus 0 514
ENSMUST00000154771 Arr3-004 retained_intron Mus_musculus 0 508
ENSMUST00000166688 Arr3-008 retained_intron Mus_musculus 0 436
ENSMUST00000135237 Arr3-003 retained_intron Mus_musculus 0 254

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