C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCDIN3 domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040313 Bcdin3d-201 ENSMUSG00000037525 10090 - 15:99470084-99474730 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040313
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040313 1.382±0.33 2.955±0.91 2.956±0.46 4.595±1.66 3.191±1.28 3.528±0.96 0.920±0.34 2.995±0.41 1.809±0.66 1.907±0.64 2.298±0.96 4.598±1.36 5.053±1.97 1.977±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009W CIL_00009W_0002 CGP 15:99422035-99474730
CIL_0002BT CIL_0002BT_0002 CGP 15:99470084-99528017

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001510 ISS RNA methylation
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0008171 ISS O-methyltransferase activity
GO:0008173 ISS RNA methyltransferase activity
GO:0010586 ISS miRNA metabolic process
GO:2000632 ISS negative regulation of pre-miRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333924 BCDIN3D-001 protein_coding Homo_sapiens 0 773
ENST00000550861 BCDIN3D-002 retained_intron Homo_sapiens 0 414

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