C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EFR3 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254624 EFR3A-001 ENSG00000132294 9606 + 8:131904088-132013642 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254624
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254624 6.713±0.00 5.357±0.00 9.512±6.42 9.631±1.43 7.218±4.25 3.534±1.86 9.681±0.00 4.860±0.00 5.521±1.35 3.295±0.00 9.499±5.09 6.374±2.27 14.665±4.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZP CIL_0006ZP_0002 CGP 8:130780301-132013642
CIL_0000C9 CIL_0000C9_0003 CGP 8:131904088-132059380

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005622 IEA intracellular
GO:0005886 IEA plasma membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015146 Efr3a-001 protein_coding Mus_musculus 0 3267
ENSMUST00000173858 Efr3a-002 protein_coding Mus_musculus 0 3059
ENSMUST00000174615 Efr3a-010 retained_intron Mus_musculus 0 737
ENSMUST00000172756 Efr3a-003 protein_coding Mus_musculus 0 706
ENSMUST00000174591 Efr3a-004 retained_intron Mus_musculus 0 523
ENSMUST00000174601 Efr3a-009 processed_transcript Mus_musculus 0 523
ENSMUST00000174749 Efr3a-012 retained_intron Mus_musculus 0 427
ENSMUST00000173936 Efr3a-011 retained_intron Mus_musculus 0 285
ENSMUST00000174856 Efr3a-007 protein_coding Mus_musculus 2e-36 159

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