C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000DA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145321-ENSG00000056291 CGP 9606 4:71741693-72148067
GeneTranscriptPositionBiotype
ENSG00000145321 (GC)
group-specific component (vitamin D binding protein) 		ENST00000273951 (GC-001) 71741693-71784362 protein_coding
ENST00000503364 (GC-009) 71741708-71754478 processed_transcript
ENST00000503472 (GC-005) 71741739-71769400 processed_transcript
ENST00000504199 (GC-006) 71741696-71804041 protein_coding
ENST00000505234 (GC-008) 71763804-71769602 retained_intron
ENST00000506245 (GC-007) 71765470-71786010 protein_coding
ENST00000509740 (GC-003) 71741728-71784065 nonsense_mediated_decay
ENST00000513476 (GC-004) 71741727-71784046 protein_coding
ENSG00000248567 (RP11-545L5.1)
 ENST00000507156 (RP11-545L5.1-001) 71821305-71823980 lincRNA
CIL_0000DA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035540-ENSMUSG00000035528 CGP 10090 5:89417511-89583740
GeneTranscriptPositionBiotype
ENSMUSG00000035528 (Npffr2)
neuropeptide FF receptor 2 		ENSMUST00000048557 (Npffr2-001) 89527429-89583740 protein_coding
ENSMUSG00000035540 (Gc)
group specific component 		ENSMUST00000049209 (Gc-201) 89417511-89457898 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DA_0001ENSG00000145321ENST00000273951ENST00000503364ENST00000503472ENST00000504199ENST00000505234ENST00000506245ENST00000509740ENST00000513476ENSG00000248567ENST00000507156CIL_0000DA_0002ENSMUSG00000035528ENSMUST00000048557ENSMUSG00000035540ENSMUST00000049209
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DA_0001ENSG00000145321ENST00000273951ENST00000503364ENST00000503472ENST00000504199ENST00000506245ENST00000509740ENST00000513476ENSG00000248567ENST00000507156CIL_0000DA_0002ENSMUSG00000035528ENSMUST00000048557ENSMUSG00000035540ENSMUST00000049209
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145321 ENST00000273951 N/A N/A 1.348±0.00 N/A N/A N/A N/A 190.353±0.00 N/A N/A 0.086±0.00 N/A N/A N/A
ENST00000503364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.207±0.00 N/A
ENST00000503472 0.004±0.00 N/A N/A N/A 0.017±0.00 N/A N/A 1.833±0.00 975.179±0.00 N/A N/A N/A N/A 0.081±0.00
ENST00000504199 N/A N/A N/A N/A 1.892±0.00 N/A N/A 480.954±480.31 150.581±150.52 N/A N/A N/A N/A N/A
ENST00000505234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00
ENST00000509740 0.005±0.00 N/A N/A 0.194±0.00 N/A N/A N/A 0.584±0.00 133.689±133.60 N/A N/A 0.008±0.00 0.048±0.00 N/A
ENST00000513476 N/A N/A N/A N/A N/A N/A N/A N/A 494.991±0.00 N/A N/A N/A N/A N/A
ENSG00000248567 ENST00000507156 N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A N/A N/A 0.192±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035528 ENSMUST00000048557 N/A N/A 0.009±0.00 0.013±0.00 N/A 0.048±0.00 N/A 0.038±0.00 0.011±0.00 0.359±0.03 N/A 0.095±0.04 0.072±0.08 0.044±0.04
ENSMUSG00000035540 ENSMUST00000049209 0.195±0.10 0.470±0.13 0.032±0.00 0.050±0.01 4.573±0.32 0.178±0.17 0.303±0.28 35.701±1.99 987.168±691.11 0.669±0.24 0.137±0.19 0.750±0.59 29.889±33.25 0.030±0.01

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