C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000DW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000073920-ENSDARG00000041546 CGP 7955 9:24520164-24751959
GeneTranscriptPositionBiotype
ENSDARG00000041546 (gypc)
glycophorin C (Gerbich blood group) 		ENSDART00000060905 (gypc-001) 24699122-24751959 protein_coding
ENSDARG00000057102 (BX957274.1)
Uncharacterized protein 		ENSDART00000079706 (BX957274.1-201) 24729081-24730908 protein_coding
ENSDARG00000073920 (cntnap5a)
contactin associated protein-like 5a 		ENSDART00000112295 (cntnap5a-201) 24520164-24661310 protein_coding
ENSDART00000137759 (cntnap5a-001) 24545258-24658577 protein_coding
ENSDART00000138420 (cntnap5a-002) 24545328-24559597 retained_intron
ENSDART00000139982 (cntnap5a-003) 24580990-24589322 processed_transcript
ENSDARG00000092585 (si:dkey-155f10.2)
si:dkey-155f10.2 		ENSDART00000147979 (si:dkey-155f10.2-001) 24730269-24733801 processed_transcript
CIL_0000DW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155052-ENSG00000136732 CGP 9606 2:124025287-126696675
GeneTranscriptPositionBiotype
ENSG00000136732 (GYPC)
glycophorin C (Gerbich blood group) 		ENST00000259254 (GYPC-001) 126655933-126696670 protein_coding
ENST00000356887 (GYPC-201) 126655935-126696675 protein_coding
ENST00000409836 (GYPC-002) 126656184-126696664 protein_coding
ENST00000459787 (GYPC-005) 126656142-126678887 processed_transcript
ENST00000464053 (GYPC-003) 126656189-126696667 processed_transcript
ENST00000484700 (GYPC-004) 126656133-126658192 processed_transcript
ENSG00000213236 (YWHAZP2)
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta pseudogene 2 		ENST00000440317 (YWHAZP2-001) 126557435-126558162 processed_pseudogene
ENSG00000226813 (AC114813.1)
 ENST00000455174 (AC114813.1-001) 126110099-126117985 lincRNA
ENSG00000235128 (AC013474.4)
 ENST00000440018 (AC013474.4-001) 126679622-126680420 processed_pseudogene
ENSG00000235491 (AC097499.1)
 ENST00000430692 (AC097499.1-001) 125710969-125765842 lincRNA
ENSG00000270815 (RP11-56O18.1)
 ENST00000605094 (RP11-56O18.1-001) 124778454-124778640 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DW_0001ENSDARG00000041546ENSDART00000060905ENSDARG00000057102ENSDART00000079706ENSDARG00000073920ENSDART00000112295ENSDART00000137759ENSDART00000138420ENSDART00000139982ENSDARG00000092585ENSDART00000147979CIL_0000DW_0002ENSG00000136732ENST00000259254ENST00000356887ENST00000409836ENST00000459787ENST00000464053ENST00000484700ENSG00000213236ENST00000440317ENSG00000226813ENST00000455174ENSG00000235128ENST00000440018ENSG00000235491ENST00000430692ENSG00000270815ENST00000605094
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DW_0001ENSDARG00000041546ENSDART00000060905ENSDARG00000057102ENSDART00000079706ENSDARG00000073920ENSDART00000112295ENSDART00000137759ENSDARG00000092585ENSDART00000147979CIL_0000DW_0002ENSG00000136732ENST00000259254ENST00000409836ENST00000464053ENSG00000213236ENST00000440317ENSG00000226813ENST00000455174ENSG00000235128ENST00000440018ENSG00000235491ENST00000430692ENSG00000270815ENST00000605094
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041546 ENSDART00000060905 N/A N/A N/A 1.403±0.50 N/A N/A 25.490±15.62 6.207±0.54 0.301±0.00 N/A N/A N/A N/A N/A
ENSDARG00000057102 ENSDART00000079706 N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000073920 ENSDART00000112295 N/A N/A N/A 4.325±0.39 N/A N/A N/A 0.220±0.11 N/A N/A 0.080±0.00 N/A N/A N/A
ENSDART00000137759 N/A N/A N/A N/A N/A N/A 0.018±0.01 N/A N/A N/A 0.080±0.00 N/A N/A N/A
ENSDART00000138420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000092585 ENSDART00000147979 N/A N/A N/A 1.577±1.45 N/A N/A 3.464±3.37 2.297±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136732 ENST00000259254 43.205±0.00 46.996±0.00 0.816±0.00 1.406±0.21 31.108±25.84 24.333±21.96 14.586±8.47 5.792±4.97 5.970±4.93 14.269±8.85 10.374±1.42 22.751±25.09 19.518±4.87 12.957±0.00
ENST00000356887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409836 50.266±0.00 107.188±0.00 1.385±0.00 4.111±0.00 25.950±23.91 20.613±19.71 41.518±0.00 13.454±0.00 6.569±0.00 25.987±24.00 18.155±3.49 20.012±13.48 14.388±3.29 12.891±10.46
ENST00000459787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464053 N/A N/A 0.189±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213236 ENST00000440317 0.114±0.00 0.119±0.00 N/A 0.151±0.00 0.050±0.00 0.155±0.00 0.077±0.00 0.201±0.15 N/A N/A 0.015±0.00 0.088±0.08 N/A 0.108±0.06
ENSG00000226813 ENST00000455174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.179±0.05
ENSG00000235128 ENST00000440018 0.463±0.00 0.986±0.00 0.303±0.00 0.210±0.06 0.275±0.07 0.135±0.00 0.214±0.10 0.229±0.12 0.205±0.19 0.515±0.25 0.675±0.53 0.159±0.08 0.127±0.00 0.157±0.04
ENSG00000235491 ENST00000430692 N/A N/A N/A N/A N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A
ENSG00000270815 ENST00000605094 0.375±0.00 N/A N/A 2.335±0.00 N/A N/A 1.772±0.00 N/A N/A N/A N/A N/A N/A N/A

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