C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000E5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005414-ENSDARG00000008377 CGP 7955 3:39625712-39685000
GeneTranscriptPositionBiotype
ENSDARG00000005414 (grapa)
GRB2-related adaptor protein a 		ENSDART00000055171 (grapa-001) 39625712-39642803 protein_coding
ENSDARG00000008377 (epn2)
epsin 2 		ENSDART00000055176 (epn2-201) 39658769-39684999 protein_coding
ENSDART00000153866 (epn2-002) 39659038-39661472 protein_coding
ENSDART00000156038 (epn2-001) 39651031-39685000 protein_coding
ENSDARG00000011727 (b9d1)
B9 protein domain 1 		ENSDART00000015393 (b9d1-001) 39686307-39690848 protein_coding
ENSDART00000127279 (b9d1-201) 39684324-39690874 protein_coding
ENSDART00000145303 (b9d1-002) 39687140-39690840 retained_intron
ENSDART00000148247 (b9d1-003) 39687015-39690638 protein_coding
CIL_0000E5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000189152-ENSG00000072134 CGP 9606 17:19127469-19336715
GeneTranscriptPositionBiotype
ENSG00000189152 (GRAPL)
GRB2-related adaptor protein-like 		ENST00000344415 (GRAPL-001) 19127469-19159176 protein_coding
ENST00000437957 (GRAPL-003) 19132053-19138588 protein_coding
ENST00000574324 (GRAPL-004) 19132719-19159000 protein_coding
ENST00000577213 (GRAPL-005) 19127535-19139070 protein_coding
ENST00000583540 (GRAPL-002) 19138549-19158783 nonsense_mediated_decay
ENSG00000197665 (AC007952.6)
 ENST00000399083 (AC007952.6-002) 19157781-19159111 antisense
ENST00000399087 (AC007952.6-001) 19155727-19158893 antisense
ENSG00000235397 (EPN2-AS1)
EPN2 antisense RNA 1 		ENST00000451099 (EPN2-AS1-001) 19296596-19306261 antisense
ENSG00000261987 (KYNUP1)
kynureninase pseudogene 1 		ENST00000466683 (KYNUP1-001) 19166896-19169668 unprocessed_pseudogene
ENSG00000262292 (RP11-160E2.11)
 ENST00000572818 (RP11-160E2.11-001) 19160789-19162274 lincRNA
ENSG00000262319 (CTC-457L16.2)
 ENST00000573168 (CTC-457L16.2-001) 19141017-19143689 antisense
ENSG00000263206 (KYNUP3)
kynureninase pseudogene 3 		ENST00000574386 (KYNUP3-001) 19208584-19211359 transcribed_unprocessed_pseudogene
ENSG00000263934 (SNORD3A)
small nucleolar RNA, C/D box 3A 		ENST00000584923 (SNORD3A-001) 19188016-19188714 lincRNA
ENSG00000265263 (RP11-135L13.4)
 ENST00000581122 (RP11-135L13.4-001) 19334308-19336127 antisense
ENSG00000266664 (RP11-160E2.21)
 ENST00000584365 (RP11-160E2.21-001) 19150279-19151286 sense_intronic
ENSG00000275303 (ACEA_U3)
ACEA small nucleolar RNA U3 		ENST00000620446 (ACEA_U3.1-203) 19190028-19190245 snoRNA
ENSG00000277813 (ACEA_U3)
ACEA small nucleolar RNA U3 		ENST00000620232 (ACEA_U3.1-206) 19188016-19188233 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000E5_0001ENSDARG00000005414ENSDART00000055171ENSDARG00000008377ENSDART00000055176ENSDART00000153866ENSDART00000156038ENSDARG00000011727ENSDART00000015393ENSDART00000127279ENSDART00000145303ENSDART00000148247CIL_0000E5_0002ENSG00000189152ENST00000344415ENST00000437957ENST00000574324ENST00000577213ENST00000583540ENSG00000197665ENST00000399083ENST00000399087ENSG00000235397ENST00000451099ENSG00000261987ENST00000466683ENSG00000262292ENST00000572818ENSG00000262319ENST00000573168ENSG00000263206ENST00000574386ENSG00000263934ENST00000584923ENSG00000265263ENST00000581122ENSG00000266664ENST00000584365ENSG00000275303ENST00000620446ENSG00000277813ENST00000620232
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000E5_0001ENSDARG00000005414ENSDART00000055171ENSDARG00000008377ENSDART00000055176ENSDART00000156038ENSDARG00000011727ENSDART00000015393CIL_0000E5_0002ENSG00000189152ENST00000344415ENST00000574324ENST00000577213ENST00000583540ENSG00000197665ENST00000399083ENST00000399087ENSG00000235397ENST00000451099ENSG00000261987ENST00000466683ENSG00000262292ENST00000572818ENSG00000262319ENST00000573168ENSG00000263206ENST00000574386ENSG00000263934ENST00000584923ENSG00000265263ENST00000581122ENSG00000266664ENST00000584365ENSG00000275303ENST00000620446ENSG00000277813ENST00000620232
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005414 ENSDART00000055171 N/A N/A N/A 2.090±0.61 N/A N/A 7.987±4.38 6.553±2.57 0.737±0.00 N/A 3.635±0.00 N/A N/A N/A
ENSDARG00000008377 ENSDART00000055176 N/A N/A N/A 3.666±1.60 N/A N/A 4.868±2.28 3.361±1.38 0.785±0.00 N/A 3.899±0.00 N/A N/A N/A
ENSDART00000153866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156038 N/A N/A N/A 2.461±0.08 N/A N/A 1.926±0.33 2.770±0.00 0.205±0.00 N/A 0.855±0.00 N/A N/A N/A
ENSDARG00000011727 ENSDART00000015393 N/A N/A N/A 5.806±0.48 N/A N/A N/A 2.051±0.17 N/A N/A N/A N/A N/A N/A
ENSDART00000127279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000189152 ENST00000344415 0.066±0.00 N/A N/A N/A N/A 0.083±0.00 0.070±0.00 0.069±0.00 0.163±0.00 N/A N/A 0.043±0.00 0.201±0.16 N/A
ENST00000437957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574324 N/A N/A 0.213±0.00 N/A N/A N/A N/A N/A N/A 0.270±0.00 N/A 0.133±0.00 0.311±0.00 N/A
ENST00000577213 0.215±0.00 6.307±0.00 N/A 0.036±0.00 0.381±0.00 0.115±0.06 0.144±0.06 0.163±0.00 0.077±0.00 0.321±0.05 N/A 0.111±0.03 0.387±0.00 0.349±0.02
ENST00000583540 0.239±0.00 2.211±0.00 N/A N/A 0.733±0.00 N/A 0.147±0.00 0.340±0.00 N/A 0.286±0.00 N/A 0.174±0.11 N/A N/A
ENSG00000197665 ENST00000399083 0.054±0.00 1.291±0.00 0.199±0.00 N/A 0.400±0.31 N/A N/A 0.144±0.00 N/A 0.182±0.00 N/A 0.135±0.07 0.527±0.31 0.197±0.07
ENST00000399087 0.115±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A 0.119±0.00 N/A N/A
ENSG00000235397 ENST00000451099 0.105±0.00 0.264±0.00 0.600±0.00 0.343±0.23 0.230±0.00 0.427±0.35 0.105±0.03 0.077±0.04 0.190±0.10 0.067±0.00 0.049±0.00 0.071±0.02 0.027±0.00 0.035±0.02
ENSG00000261987 ENST00000466683 N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000262292 ENST00000572818 N/A 3.150±0.00 N/A 0.013±0.00 0.290±0.00 0.365±0.00 0.043±0.00 0.037±0.00 0.032±0.00 0.271±0.05 N/A 0.179±0.06 0.077±0.01 0.039±0.02
ENSG00000262319 ENST00000573168 0.014±0.00 0.373±0.00 N/A N/A 0.008±0.00 N/A 0.014±0.00 0.015±0.00 N/A N/A N/A N/A 0.025±0.00 0.177±0.00
ENSG00000263206 ENST00000574386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00
ENSG00000263934 ENST00000584923 N/A N/A 1.603±0.00 N/A N/A N/A 9.534±0.00 N/A 14.901±0.00 N/A N/A 3.803±3.76 N/A N/A
ENSG00000265263 ENST00000581122 7.432±0.00 5.401±0.00 1.068±0.00 10.048±4.92 3.659±1.39 6.402±4.73 5.511±4.45 3.848±3.37 2.367±0.62 7.181±3.46 3.784±2.33 7.008±3.50 10.756±0.93 12.110±0.36
ENSG00000266664 ENST00000584365 0.345±0.00 5.570±0.00 N/A 0.090±0.00 1.255±0.00 N/A 0.078±0.00 0.252±0.00 0.295±0.00 N/A N/A 5.790±0.00 N/A 0.241±0.08
ENSG00000275303 ENST00000620446 N/A N/A 4.970±0.00 N/A 8.738±0.00 3.974±0.00 2.400±0.00 N/A 6.915±0.00 N/A N/A N/A 0.211±0.00 0.214±0.00
ENSG00000277813 ENST00000620232 1.219±0.00 10.104±0.00 68.404±0.00 158.308±0.00 219.681±218.98 208.110±207.83 82.121±82.03 31.248±28.03 156.593±154.00 125.973±123.47 233.341±232.09 260.376±320.93 155.788±200.79 91.807±89.27

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