C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000F6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019489-ENSDARG00000006705 CGP 7955 2:23053276-23128679
GeneTranscriptPositionBiotype
ENSDARG00000006705 (pkn2)
protein kinase N2
ENSDART00000089357 (pkn2-201) 23068424-23119267 protein_coding
ENSDART00000131763 (pkn2-001) 23065455-23128679 protein_coding
ENSDARG00000019489 (gtf2b)
general transcription factor IIB
ENSDART00000023346 (gtf2b-001) 23053276-23065491 protein_coding
CIL_0000F6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028271-ENSMUSG00000004591 CGP 10090 3:142765226-142882004
GeneTranscriptPositionBiotype
ENSMUSG00000004591 (Pkn2)
protein kinase N2
ENSMUST00000043812 (Pkn2-001) 142790902-142882004 protein_coding
ENSMUST00000166330 (Pkn2-003) 142799952-142881920 processed_transcript
ENSMUST00000172521 (Pkn2-002) 142804789-142881990 processed_transcript
ENSMUST00000172916 (Pkn2-004) 142830238-142881983 retained_intron
ENSMUST00000173615 (Pkn2-011) 142809642-142821598 nonsense_mediated_decay
ENSMUST00000173830 (Pkn2-007) 142793811-142881658 protein_coding
ENSMUST00000173913 (Pkn2-006) 142793709-142881915 nonsense_mediated_decay
ENSMUST00000174099 (Pkn2-008) 142821309-142829258 retained_intron
ENSMUST00000174169 (Pkn2-010) 142810759-142812582 retained_intron
ENSMUST00000174422 (Pkn2-005) 142793811-142881658 protein_coding
ENSMUST00000174680 (Pkn2-009) 142811553-142829295 protein_coding
ENSMUSG00000028271 (Gtf2b)
general transcription factor IIB
ENSMUST00000029938 (Gtf2b-201) 142765226-142783603 protein_coding
ENSMUSG00000087795 (Gm25965)
predicted gene, 25965
ENSMUST00000157170 (Gm25965-201) 142795102-142795194 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000F6_0001ENSDARG00000006705ENSDART00000089357ENSDART00000131763ENSDARG00000019489ENSDART00000023346CIL_0000F6_0002ENSMUSG00000004591ENSMUST00000043812ENSMUST00000166330ENSMUST00000172521ENSMUST00000172916ENSMUST00000173615ENSMUST00000173830ENSMUST00000173913ENSMUST00000174099ENSMUST00000174169ENSMUST00000174422ENSMUST00000174680ENSMUSG00000028271ENSMUST00000029938ENSMUSG00000087795ENSMUST00000157170
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000F6_0001ENSDARG00000006705ENSDART00000089357ENSDART00000131763ENSDARG00000019489ENSDART00000023346CIL_0000F6_0002ENSMUSG00000004591ENSMUST00000043812ENSMUST00000172521ENSMUST00000172916ENSMUST00000173830ENSMUST00000173913ENSMUST00000174422ENSMUSG00000028271ENSMUST00000029938ENSMUSG00000087795ENSMUST00000157170
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006705 ENSDART00000089357 N/A N/A N/A N/A N/A N/A N/A 1.877±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000131763 N/A N/A N/A 0.899±0.00 N/A N/A 1.060±0.65 2.319±0.00 0.393±0.00 N/A 0.594±0.00 N/A N/A N/A
ENSDARG00000019489 ENSDART00000023346 N/A N/A N/A 18.254±1.83 N/A N/A 10.126±0.42 11.419±5.22 3.863±0.00 N/A 8.465±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004591 ENSMUST00000043812 6.815±2.00 4.015±0.62 4.427±1.02 4.001±0.39 5.804±0.62 5.132±1.01 3.597±0.80 6.086±0.90 5.581±3.20 7.905±1.40 0.948±0.24 7.127±0.76 8.165±4.41 3.799±0.82
ENSMUST00000166330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172521 3.150±0.00 2.602±0.00 N/A N/A 2.206±0.00 4.338±0.17 N/A 2.809±0.53 0.784±0.00 3.121±0.00 N/A 3.805±0.00 N/A 3.652±0.59
ENSMUST00000172916 N/A 37.298±12.60 N/A 3.380±0.00 24.496±1.80 18.237±2.96 N/A 10.473±0.00 1.853±0.00 17.632±8.42 N/A 28.769±6.58 62.856±8.73 13.221±0.00
ENSMUST00000173615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173830 N/A N/A N/A 4.707±0.00 N/A N/A N/A N/A N/A N/A N/A 12.742±0.00 13.698±0.00 8.062±0.00
ENSMUST00000173913 N/A N/A N/A N/A N/A N/A 1.080±0.00 N/A N/A N/A N/A N/A 13.587±2.35 3.775±0.77
ENSMUST00000174099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.609±0.00 24.285±4.07 14.546±0.00
ENSMUST00000174680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028271 ENSMUST00000029938 12.098±0.84 14.712±1.58 19.335±3.36 24.749±5.38 12.238±2.25 11.578±1.76 8.473±0.47 14.426±2.39 23.692±17.00 16.050±1.43 7.251±0.59 18.599±8.89 60.435±12.47 35.599±1.01
ENSMUSG00000087795 ENSMUST00000157170 2897.570±0.00 N/A N/A N/A N/A N/A 4084.310±0.00 N/A N/A N/A N/A N/A N/A N/A

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