C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000HD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132530-ENSG00000177294 CGP 9606 17:6755447-6797101
GeneTranscriptPositionBiotype
ENSG00000132530 (XAF1)
XIAP associated factor 1 		ENST00000346752 (XAF1-002) 6755838-6773663 protein_coding
ENST00000361842 (XAF1-001) 6755840-6775647 protein_coding
ENST00000571135 (XAF1-018) 6756077-6760479 nonsense_mediated_decay
ENST00000571217 (XAF1-005) 6756062-6774108 nonsense_mediated_decay
ENST00000571673 (XAF1-007) 6756079-6773169 nonsense_mediated_decay
ENST00000572107 (XAF1-010) 6756053-6758716 processed_transcript
ENST00000572495 (XAF1-009) 6757397-6758592 retained_intron
ENST00000572546 (XAF1-020) 6756046-6762193 nonsense_mediated_decay
ENST00000573518 (XAF1-012) 6761718-6770780 retained_intron
ENST00000573760 (XAF1-014) 6755447-6758632 retained_intron
ENST00000574394 (XAF1-016) 6755565-6760581 protein_coding
ENST00000574907 (XAF1-011) 6756067-6762206 protein_coding
ENST00000574962 (XAF1-006) 6756079-6773169 nonsense_mediated_decay
ENST00000575147 (XAF1-013) 6756067-6762025 nonsense_mediated_decay
ENST00000575267 (XAF1-019) 6756048-6758175 processed_transcript
ENST00000575369 (XAF1-003) 6755448-6771928 nonsense_mediated_decay
ENST00000576341 (XAF1-015) 6755451-6758329 retained_intron
ENST00000576459 (XAF1-017) 6756046-6759556 processed_transcript
ENST00000576724 (XAF1-021) 6756055-6770969 nonsense_mediated_decay
ENSG00000167858 (TEKT1)
tektin 1 		ENST00000338694 (TEKT1-001) 6797993-6831761 protein_coding
ENST00000571744 (TEKT1-005) 6789133-6813016 protein_coding
ENST00000572291 (TEKT1-004) 6799981-6815177 protein_coding
ENST00000573966 (TEKT1-003) 6814935-6831758 retained_intron
ENST00000575592 (TEKT1-002) 6799661-6831761 nonsense_mediated_decay
ENSG00000177294 (FBXO39)
F-box protein 39 		ENST00000321535 (FBXO39-001) 6776223-6787646 protein_coding
ENST00000572251 (FBXO39-002) 6786815-6796635 nonsense_mediated_decay
ENST00000575022 (FBXO39-003) 6786870-6797101 nonsense_mediated_decay
ENSG00000279296 (RP11-609D21.3)
 ENST00000624952 (RP11-609D21.3-001) 6772831-6776116 TEC
CIL_0000HD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040483-ENSMUSG00000070388 CGP 10090 11:72301629-72319416
GeneTranscriptPositionBiotype
ENSMUSG00000040483 (Xaf1)
XIAP associated factor 1 		ENSMUST00000094041 (Xaf1-003) 72301663-72308749 nonsense_mediated_decay
ENSMUST00000140842 (Xaf1-005) 72301639-72312081 protein_coding
ENSMUST00000142921 (Xaf1-004) 72301665-72308768 retained_intron
ENSMUST00000146233 (Xaf1-001) 72301630-72313733 protein_coding
ENSMUST00000151440 (Xaf1-002) 72301629-72309061 protein_coding
ENSMUSG00000070388 (Fbxo39)
F-box protein 39 		ENSMUST00000108504 (Fbxo39-001) 72314444-72319416 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HD_0001ENSG00000132530ENST00000346752ENST00000361842ENST00000571135ENST00000571217ENST00000571673ENST00000572107ENST00000572495ENST00000572546ENST00000573518ENST00000573760ENST00000574394ENST00000574907ENST00000574962ENST00000575147ENST00000575267ENST00000575369ENST00000576341ENST00000576459ENST00000576724ENSG00000167858ENST00000338694ENST00000571744ENST00000572291ENST00000573966ENST00000575592ENSG00000177294ENST00000321535ENST00000572251ENST00000575022ENSG00000279296ENST00000624952CIL_0000HD_0002ENSMUSG00000040483ENSMUST00000094041ENSMUST00000140842ENSMUST00000142921ENSMUST00000146233ENSMUST00000151440ENSMUSG00000070388ENSMUST00000108504
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HD_0001ENSG00000132530ENST00000346752ENST00000571135ENST00000571673ENST00000575369ENST00000576724ENSG00000167858ENST00000338694ENST00000571744ENST00000572291ENST00000573966ENST00000575592ENSG00000177294ENST00000321535ENST00000572251ENST00000575022ENSG00000279296ENST00000624952CIL_0000HD_0002ENSMUSG00000040483ENSMUST00000094041ENSMUST00000140842ENSMUST00000142921ENSMUST00000146233ENSMUST00000151440ENSMUSG00000070388ENSMUST00000108504
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132530 ENST00000346752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.776±0.00 N/A N/A N/A
ENST00000361842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.809±0.00 N/A N/A N/A
ENST00000571217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.256±0.00 N/A N/A N/A
ENST00000572107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575369 N/A N/A N/A N/A N/A 1.540±0.00 0.961±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000576341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.799±0.00 N/A N/A N/A
ENSG00000167858 ENST00000338694 N/A N/A N/A 0.092±0.03 N/A N/A N/A N/A N/A 2.036±1.16 N/A 0.373±0.48 N/A N/A
ENST00000571744 0.092±0.00 0.200±0.00 N/A N/A N/A N/A N/A 0.153±0.00 N/A N/A N/A 0.374±0.00 N/A N/A
ENST00000572291 N/A 0.122±0.00 N/A N/A 0.087±0.00 0.039±0.00 N/A N/A N/A N/A N/A 0.078±0.00 N/A 9.965±0.00
ENST00000573966 N/A N/A N/A 0.130±0.00 0.173±0.00 N/A N/A 0.144±0.09 N/A 0.958±0.00 N/A N/A N/A N/A
ENST00000575592 N/A N/A N/A 0.109±0.09 N/A N/A N/A N/A N/A 4.378±3.99 N/A 1.497±1.46 N/A 4.673±1.29
ENSG00000177294 ENST00000321535 N/A 0.038±0.00 0.099±0.00 0.010±0.00 N/A 0.174±0.00 0.026±0.00 0.068±0.00 N/A 0.126±0.00 N/A 0.305±0.17 0.057±0.00 19.907±9.27
ENST00000572251 N/A 0.069±0.00 N/A 0.014±0.00 N/A 0.396±0.00 N/A N/A N/A 0.095±0.00 N/A 0.278±0.00 0.074±0.00 N/A
ENST00000575022 0.210±0.00 N/A N/A N/A 0.010±0.00 0.453±0.00 N/A N/A N/A N/A N/A 0.191±0.09 N/A N/A
ENSG00000279296 ENST00000624952 2.931±0.00 6.970±0.00 N/A N/A 17.599±9.93 N/A 5.379±0.71 2.474±0.00 2.635±0.00 29.262±0.00 0.591±0.23 17.521±5.18 7.184±0.00 9.351±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040483 ENSMUST00000094041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.158±0.00 N/A
ENSMUST00000140842 N/A N/A N/A 1.264±0.00 N/A N/A N/A N/A 3.502±1.95 N/A 1.392±0.37 11.402±3.60 11.769±9.28 N/A
ENSMUST00000142921 N/A N/A 2.160±0.00 0.074±0.01 N/A N/A 0.892±0.00 N/A 0.670±0.66 N/A 0.474±0.14 1.441±0.29 0.840±0.28 0.278±0.05
ENSMUST00000146233 7.380±1.69 10.380±3.18 1.375±0.05 0.136±0.06 12.339±2.39 2.595±1.04 1.373±0.00 N/A 0.925±0.57 5.481±0.95 0.289±0.08 10.322±4.89 2.301±3.44 0.947±0.60
ENSMUST00000151440 N/A N/A N/A N/A N/A 3.370±0.00 N/A N/A N/A N/A N/A 2.799±0.00 N/A N/A
ENSMUSG00000070388 ENSMUST00000108504 0.094±0.05 0.055±0.02 0.029±0.00 0.013±0.01 0.100±0.03 0.056±0.02 0.092±0.03 0.049±0.03 0.021±0.01 0.117±0.05 0.043±0.02 0.073±0.06 0.052±0.03 50.253±4.57

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