C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: XIAP associated factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040483 Xaf1 10090 + 11:72301629-72313733 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094041 Xaf1-003 72301663-72308749 nonsense_mediated_decay
  ENSMUST00000140842 Xaf1-005 72301639-72312081 protein_coding
  ENSMUST00000142921 Xaf1-004 72301665-72308768 retained_intron
  ENSMUST00000146233 Xaf1-001 72301630-72313733 protein_coding
  ENSMUST00000151440 Xaf1-002 72301629-72309061 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000094041ENSMUST00000140842ENSMUST00000142921ENSMUST00000146233ENSMUST00000151440
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.158±0.00 N/A
ENSMUST00000140842 N/A N/A N/A 1.264±0.00 N/A N/A N/A 3.502±1.95 N/A 1.392±0.37 11.402±3.60 11.769±9.28 N/A
ENSMUST00000142921 N/A N/A 2.160±0.00 0.074±0.01 N/A N/A 0.892±0.00 0.670±0.66 N/A 0.474±0.14 1.441±0.29 0.840±0.28 0.278±0.05
ENSMUST00000146233 7.380±1.69 10.380±3.18 1.375±0.05 0.136±0.06 12.339±2.39 2.595±1.04 1.373±0.00 0.925±0.57 5.481±0.95 0.289±0.08 10.322±4.89 2.301±3.44 0.947±0.60
ENSMUST00000151440 N/A N/A N/A N/A N/A 3.370±0.00 N/A N/A N/A N/A 2.799±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HE CIL_0000HE_0002 CGP 11:72241994-72313733
CIL_0000HD CIL_0000HD_0002 CGP 11:72301629-72319416

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0006915 IEA apoptotic process
GO:0031333 IEA negative regulation of protein complex assembly
GO:0035456 IEA response to interferon-beta
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068939 XAF1 XIAP associated factor 1 protein_coding Danio_rerio
ENSG00000132530 XAF1 XIAP associated factor 1 protein_coding Homo_sapiens

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