C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000I4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178974-ENSG00000126775 CGP 9606 14:55271303-55411858
GeneTranscriptPositionBiotype
ENSG00000126775 (ATG14)
autophagy related 14 		ENST00000247178 (ATG14-001) 55366392-55411858 protein_coding
ENST00000558189 (ATG14-002) 55366392-55391302 retained_intron
ENSG00000178974 (FBXO34)
F-box protein 34 		ENST00000313833 (FBXO34-001) 55271303-55353609 protein_coding
ENST00000440021 (FBXO34-201) 55272154-55353083 protein_coding
ENST00000554940 (FBXO34-005) 55271423-55350864 processed_transcript
ENST00000555087 (FBXO34-006) 55272154-55350840 processed_transcript
ENST00000555280 (FBXO34-003) 55350789-55361918 nonsense_mediated_decay
ENST00000557647 (FBXO34-004) 55272211-55355084 processed_transcript
ENSG00000239686 (RP11-665C16.1)
 ENST00000488313 (RP11-665C16.1-001) 55282296-55282643 processed_pseudogene
ENSG00000258455 (RP11-665C16.5)
 ENST00000555514 (RP11-665C16.5-001) 55325834-55339501 antisense
ENSG00000258469 (CHMP4BP1)
charged multivesicular body protein 4B pseudogene 1 		ENST00000556017 (CHMP4BP1-001) 55298644-55299231 processed_pseudogene
ENSG00000259318 (RP11-454L9.2)
 ENST00000559320 (RP11-454L9.2-001) 55394940-55395233 processed_pseudogene
ENSG00000278818 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000612004 (Metazoa_SRP.1-497) 55285227-55285558 misc_RNA
CIL_0000I4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037536-ENSMUSG00000037526 CGP 10090 14:47472561-47568434
GeneTranscriptPositionBiotype
ENSMUSG00000037526 (Atg14)
autophagy related 14 		ENSMUST00000042988 (Atg14-201) 47540894-47568434 protein_coding
ENSMUSG00000037536 (Fbxo34)
F-box protein 34 		ENSMUST00000043112 (Fbxo34-201) 47472561-47531962 protein_coding
ENSMUST00000095941 (Fbxo34-202) 47472634-47531900 protein_coding
ENSMUST00000163324 (Fbxo34-203) 47472561-47531962 protein_coding
ENSMUST00000165714 (Fbxo34-204) 47507352-47531955 protein_coding
ENSMUST00000168833 (Fbxo34-205) 47472561-47531962 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000I4_0001ENSG00000126775ENST00000247178ENST00000558189ENSG00000178974ENST00000313833ENST00000440021ENST00000554940ENST00000555087ENST00000555280ENST00000557647ENSG00000239686ENST00000488313ENSG00000258455ENST00000555514ENSG00000258469ENST00000556017ENSG00000259318ENST00000559320ENSG00000278818ENST00000612004CIL_0000I4_0002ENSMUSG00000037526ENSMUST00000042988ENSMUSG00000037536ENSMUST00000043112ENSMUST00000095941ENSMUST00000163324ENSMUST00000165714ENSMUST00000168833
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000I4_0001ENSG00000126775ENST00000247178ENST00000558189ENSG00000178974ENST00000313833ENST00000440021ENST00000554940ENST00000555087ENST00000555280ENSG00000239686ENST00000488313ENSG00000258455ENST00000555514ENSG00000258469ENST00000556017ENSG00000259318ENST00000559320ENSG00000278818ENST00000612004CIL_0000I4_0002ENSMUSG00000037526ENSMUST00000042988ENSMUSG00000037536ENSMUST00000043112ENSMUST00000095941ENSMUST00000163324ENSMUST00000168833
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000126775 ENST00000247178 4.518±0.00 3.957±0.00 N/A 2.899±1.18 3.817±1.62 2.949±1.93 2.719±1.49 1.781±1.37 1.298±0.05 1.444±0.47 3.746±2.92 3.735±1.45 3.275±0.47 8.630±0.05
ENST00000558189 N/A 1.751±0.00 0.429±0.00 0.614±0.00 0.592±0.06 0.737±0.00 0.556±0.11 0.401±0.00 0.525±0.00 0.579±0.33 1.146±0.00 0.731±0.04 N/A N/A
ENSG00000178974 ENST00000313833 4.167±0.00 5.562±0.00 1.540±0.00 12.788±3.88 8.087±2.58 3.724±0.90 3.007±2.02 8.721±0.00 4.859±0.00 5.533±0.39 11.465±7.68 5.531±0.90 2.633±0.30 10.261±4.97
ENST00000440021 0.796±0.00 N/A 1.557±0.00 N/A N/A 3.262±0.00 0.460±0.00 N/A N/A N/A 2.980±0.00 1.646±0.10 0.945±0.00 N/A
ENST00000554940 N/A N/A 6.557±0.00 9.265±0.00 N/A N/A N/A N/A N/A N/A 12.036±0.00 7.864±1.07 N/A 20.121±0.00
ENST00000555087 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.516±0.00 N/A N/A N/A N/A
ENST00000555280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.150±0.00
ENST00000557647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239686 ENST00000488313 0.123±0.00 0.254±0.00 N/A N/A 0.415±0.04 1.052±0.74 0.312±0.00 0.632±0.00 0.301±0.00 0.593±0.16 N/A 0.461±0.36 N/A 0.280±0.13
ENSG00000258455 ENST00000555514 N/A 0.076±0.00 N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000258469 ENST00000556017 0.378±0.00 1.465±0.00 0.226±0.00 0.247±0.09 1.744±0.82 1.839±1.06 0.114±0.08 0.094±0.02 0.523±0.00 1.093±0.40 0.534±0.13 0.929±0.76 0.176±0.07 1.593±0.94
ENSG00000259318 ENST00000559320 0.351±0.00 N/A 0.285±0.00 0.918±0.31 0.812±0.59 N/A 0.814±0.56 0.057±0.00 0.051±0.00 0.293±0.00 N/A 1.636±1.97 0.092±0.00 0.297±0.01
ENSG00000278818 ENST00000612004 0.404±0.00 0.431±0.00 1.008±0.00 0.292±0.00 1.396±0.00 N/A N/A N/A 0.204±0.01 0.421±0.00 0.096±0.00 0.678±0.18 0.193±0.00 0.637±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037526 ENSMUST00000042988 4.228±1.41 5.222±0.69 5.239±0.13 5.148±0.77 3.810±0.50 4.916±0.57 2.730±0.56 4.881±0.48 3.756±0.34 5.486±0.15 2.401±0.16 7.358±0.94 6.794±1.84 2.490±0.31
ENSMUSG00000037536 ENSMUST00000043112 1.103±0.00 1.112±0.13 1.796±0.18 4.061±3.71 1.894±1.01 N/A 0.372±0.00 0.683±0.10 3.000±2.35 0.725±0.00 0.912±0.26 4.083±4.00 1.266±0.42 N/A
ENSMUST00000095941 N/A N/A N/A 2.545±0.00 N/A N/A N/A N/A 0.507±0.00 N/A N/A 1.857±0.00 1.131±0.00 3.872±0.08
ENSMUST00000163324 2.367±0.14 2.872±1.01 1.064±0.21 1.688±0.40 2.410±0.30 4.136±0.78 1.114±0.45 1.388±0.31 1.520±0.56 2.158±0.55 1.328±0.66 4.258±1.75 0.993±0.37 6.221±1.01
ENSMUST00000165714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168833 3.031±0.49 4.177±0.89 3.034±0.70 4.996±0.27 2.589±0.86 5.286±1.18 1.637±0.45 3.643±1.13 6.906±5.25 2.888±0.88 1.298±0.44 6.725±1.22 3.561±1.19 9.860±1.16

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