C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: charged multivesicular body protein 4B pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556017 CHMP4BP1-001 ENSG00000258469 9606 + 14:55298644-55299231 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000556017
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000556017 0.378±0.00 1.465±0.00 0.226±0.00 0.247±0.09 1.744±0.82 1.839±1.06 0.114±0.08 0.094±0.02 0.523±0.00 1.093±0.40 0.534±0.13 0.929±0.76 0.176±0.07 1.593±0.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000I4 CIL_0000I4_0001 CGP 14:55271303-55411858

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044277 Chmp4b-001 protein_coding Mus_musculus 0 649
ENSMUST00000151668 Chmp4b-002 processed_transcript Mus_musculus 0 494
ENSMUST00000136788 Chmp4b-003 retained_intron Mus_musculus 0 285

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