C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000II_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182180-ENSG00000156042 CGP 9606 10:73248843-73358859
GeneTranscriptPositionBiotype
ENSG00000156042 (TTC18)
cilia and flagella associated protein 70 		ENST00000310715 (TTC18-201) 73253759-73358859 protein_coding
ENST00000340329 (TTC18-002) 73253762-73358778 protein_coding
ENST00000355577 (TTC18-001) 73253762-73358854 protein_coding
ENST00000394865 (TTC18-202) 73253766-73291735 protein_coding
ENST00000433268 (TTC18-006) 73253762-73297116 protein_coding
ENST00000462684 (TTC18-007) 73253762-73291735 processed_transcript
ENST00000493787 (TTC18-003) 73253762-73358754 processed_transcript
ENST00000495161 (TTC18-008) 73253762-73291735 processed_transcript
ENSG00000200356 (RNU6-833P)
RNA, U6 small nuclear 833, pseudogene 		ENST00000363486 (RNU6-833P-201) 73279062-73279168 snRNA
ENSG00000207473 (Y_RNA)
Y RNA 		ENST00000384742 (Y_RNA.1-770) 73346936-73347048 misc_RNA
ENSG00000213551 (DNAJC9)
DnaJ (Hsp40) homolog, subfamily C, member 9 		ENST00000372950 (DNAJC9-001) 73242824-73248862 protein_coding
ENST00000453189 (DNAJC9-004) 73238770-73243398 processed_transcript
ENST00000469143 (DNAJC9-002) 73183362-73245981 processed_transcript
ENST00000512551 (DNAJC9-003) 73247342-73248268 processed_transcript
CIL_0000II_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049960-ENSMUSG00000039543 CGP 10090 14:20391231-20452226
GeneTranscriptPositionBiotype
ENSMUSG00000039543 (Ttc18)
cilia and flagella associated protein 70 		ENSMUST00000022348 (Ttc18-201) 20394190-20452225 protein_coding
ENSMUST00000022349 (Ttc18-202) 20394190-20452225 protein_coding
ENSMUST00000056073 (Ttc18-203) 20394190-20452225 protein_coding
ENSMUST00000141432 (Ttc18-003) 20424908-20452226 retained_intron
ENSMUST00000143940 (Ttc18-002) 20447360-20448701 retained_intron
ENSMUST00000144797 (Ttc18-001) 20394193-20452222 protein_coding
ENSMUST00000148692 (Ttc18-004) 20425409-20429988 processed_transcript
ENSMUST00000151077 (Ttc18-005) 20439665-20452223 protein_coding
ENSMUSG00000049960 (Mrps16)
mitochondrial ribosomal protein S16 		ENSMUST00000061444 (Mrps16-201) 20391231-20393555 protein_coding
ENSMUSG00000084942 (7330404K18Rik)
RIKEN cDNA 7330404K18 gene 		ENSMUST00000125558 (7330404K18Rik-001) 20398359-20398930 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000II_0001ENSG00000156042ENST00000310715ENST00000340329ENST00000355577ENST00000394865ENST00000433268ENST00000462684ENST00000493787ENST00000495161ENSG00000200356ENST00000363486ENSG00000207473ENST00000384742ENSG00000213551ENST00000372950ENST00000453189ENST00000469143ENST00000512551CIL_0000II_0002ENSMUSG00000039543ENSMUST00000022348ENSMUST00000022349ENSMUST00000056073ENSMUST00000141432ENSMUST00000143940ENSMUST00000144797ENSMUST00000148692ENSMUST00000151077ENSMUSG00000049960ENSMUST00000061444ENSMUSG00000084942ENSMUST00000125558
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000II_0001ENSG00000156042ENST00000310715ENST00000493787ENSG00000200356ENST00000363486ENSG00000207473ENST00000384742ENSG00000213551ENST00000372950CIL_0000II_0002ENSMUSG00000039543ENSMUST00000022348ENSMUST00000022349ENSMUST00000056073ENSMUST00000143940ENSMUST00000144797ENSMUST00000148692ENSMUST00000151077ENSMUSG00000049960ENSMUST00000061444ENSMUSG00000084942ENSMUST00000125558
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156042 ENST00000310715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.226±8.17
ENST00000340329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000355577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.826±0.00
ENST00000495161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200356 ENST00000363486 N/A N/A N/A 0.614±0.00 2.015±0.00 N/A N/A 0.587±0.00 N/A 1.298±0.00 N/A 2.005±0.00 N/A 0.538±0.00
ENSG00000207473 ENST00000384742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.670±0.00
ENSG00000213551 ENST00000372950 N/A 9.106±0.00 N/A 6.375±0.23 N/A 2.664±0.00 1.674±0.00 6.786±0.00 N/A N/A N/A 9.135±1.84 5.097±0.00 15.087±5.96
ENST00000453189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039543 ENSMUST00000022348 0.016±0.00 N/A N/A 0.228±0.08 N/A N/A 0.088±0.00 0.137±0.07 0.010±0.00 N/A 0.072±0.02 0.405±0.16 0.020±0.00 7.462±2.36
ENSMUST00000022349 N/A 0.100±0.07 N/A N/A 0.031±0.00 N/A 0.042±0.00 N/A 0.013±0.00 0.135±0.00 0.077±0.00 0.319±0.17 N/A N/A
ENSMUST00000056073 0.066±0.00 N/A 0.031±0.00 0.161±0.08 N/A N/A 0.029±0.00 0.101±0.00 N/A 0.136±0.00 N/A 0.455±0.23 0.024±0.00 18.299±8.40
ENSMUST00000141432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143940 N/A N/A N/A N/A N/A N/A 0.405±0.00 1.216±0.00 0.065±0.02 N/A N/A N/A 0.104±0.00 N/A
ENSMUST00000144797 N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A N/A 0.222±0.00 N/A N/A
ENSMUST00000148692 N/A N/A N/A N/A N/A N/A N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A
ENSMUST00000151077 0.144±0.00 0.135±0.07 N/A N/A 0.085±0.03 N/A N/A N/A 0.025±0.01 N/A N/A 0.862±0.08 N/A N/A
ENSMUSG00000049960 ENSMUST00000061444 81.129±3.20 123.587±8.94 46.219±10.08 26.885±15.41 75.222±18.18 73.456±10.29 79.865±10.51 100.118±9.10 60.802±9.70 39.888±5.43 54.484±4.40 60.231±15.65 33.015±22.65 11.612±6.11
ENSMUSG00000084942 ENSMUST00000125558 N/A 0.392±0.16 N/A 0.154±0.00 N/A N/A N/A N/A 0.017±0.00 N/A 0.386±0.22 0.598±0.52 0.107±0.00 0.342±0.18

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