C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000JD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016721-ENSDARG00000008946 CGP 7955 19:7898596-7918462
GeneTranscriptPositionBiotype
ENSDARG00000008946 (ccdc127b)
coiled-coil domain containing 127b 		ENSDART00000026634 (ccdc127b-001) 7914981-7918462 protein_coding
ENSDART00000140459 (ccdc127b-002) 7915190-7918283 protein_coding
ENSDARG00000016721 (sdha)
succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 		ENSDART00000015559 (sdha-001) 7898596-7914269 protein_coding
ENSDART00000081754 (sdha-201) 7898602-7914269 protein_coding
ENSDART00000133127 (sdha-004) 7898596-7900129 processed_transcript
ENSDART00000137654 (sdha-003) 7910066-7914239 retained_intron
ENSDART00000138587 (sdha-005) 7899100-7906086 retained_intron
CIL_0000JD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021577-ENSMUSG00000021578 CGP 10090 13:74322254-74365783
GeneTranscriptPositionBiotype
ENSMUSG00000021577 (Sdha)
succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 		ENSMUST00000022062 (Sdha-001) 74322254-74350280 protein_coding
ENSMUST00000160400 (Sdha-002) 74343242-74350239 retained_intron
ENSMUST00000160667 (Sdha-006) 74337482-74350202 processed_transcript
ENSMUST00000160900 (Sdha-007) 74327295-74328471 retained_intron
ENSMUST00000161086 (Sdha-003) 74338993-74339756 retained_intron
ENSMUST00000161434 (Sdha-008) 74322732-74324256 retained_intron
ENSMUST00000161456 (Sdha-004) 74344917-74350235 processed_transcript
ENSMUST00000162137 (Sdha-005) 74344878-74350157 processed_transcript
ENSMUSG00000021578 (Ccdc127)
coiled-coil domain containing 127 		ENSMUST00000022063 (Ccdc127-001) 74350309-74365783 protein_coding
ENSMUST00000159931 (Ccdc127-004) 74350345-74360695 nonsense_mediated_decay
ENSMUST00000160021 (Ccdc127-002) 74350317-74362701 protein_coding
ENSMUST00000162376 (Ccdc127-005) 74350365-74357048 protein_coding
ENSMUST00000162672 (Ccdc127-003) 74350344-74361085 protein_coding
ENSMUSG00000021579 (Lrrc14b)
leucine rich repeat containing 14B 		ENSMUST00000022064 (Lrrc14b-001) 74359578-74364005 protein_coding
ENSMUSG00000090004 (Gm16125)
predicted gene 16125 		ENSMUST00000159003 (Gm16125-001) 74340539-74340877 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JD_0001ENSDARG00000008946ENSDART00000026634ENSDART00000140459ENSDARG00000016721ENSDART00000015559ENSDART00000081754ENSDART00000133127ENSDART00000137654ENSDART00000138587CIL_0000JD_0002ENSMUSG00000021577ENSMUST00000022062ENSMUST00000160400ENSMUST00000160667ENSMUST00000160900ENSMUST00000161086ENSMUST00000161434ENSMUST00000161456ENSMUST00000162137ENSMUSG00000021578ENSMUST00000022063ENSMUST00000159931ENSMUST00000160021ENSMUST00000162376ENSMUST00000162672ENSMUSG00000021579ENSMUST00000022064ENSMUSG00000090004ENSMUST00000159003
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JD_0001ENSDARG00000008946ENSDART00000026634ENSDART00000140459ENSDARG00000016721ENSDART00000015559ENSDART00000133127ENSDART00000138587CIL_0000JD_0002ENSMUSG00000021577ENSMUST00000022062ENSMUST00000160667ENSMUST00000160900ENSMUST00000161086ENSMUSG00000021578ENSMUST00000022063ENSMUST00000159931ENSMUST00000160021ENSMUST00000162376ENSMUSG00000021579ENSMUST00000022064ENSMUSG00000090004ENSMUST00000159003
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008946 ENSDART00000026634 N/A N/A N/A 1.022±0.00 N/A N/A 2.604±0.89 4.386±0.00 0.234±0.00 N/A 0.895±0.00 N/A N/A N/A
ENSDART00000140459 N/A N/A N/A 1.583±0.00 N/A N/A 0.646±0.00 N/A N/A N/A 0.293±0.00 N/A N/A N/A
ENSDARG00000016721 ENSDART00000015559 N/A N/A N/A 205.529±1.22 N/A N/A 225.584±30.73 34.122±0.00 11.732±0.00 N/A 91.865±0.00 N/A N/A N/A
ENSDART00000081754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133127 N/A N/A N/A 302.630±28.79 N/A N/A 21.548±5.80 7.157±0.15 N/A N/A N/A N/A N/A N/A
ENSDART00000137654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138587 N/A N/A N/A 136.511±0.00 N/A N/A 140.779±0.00 42.150±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021577 ENSMUST00000022062 142.947±20.21 116.620±27.16 68.496±1.30 56.895±15.37 157.396±36.12 73.951±23.92 389.847±8.40 265.442±36.64 109.951±38.38 58.208±5.89 239.596±12.15 89.917±9.22 56.381±19.40 32.186±10.86
ENSMUST00000160400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 55.071±0.00
ENSMUST00000160900 N/A N/A N/A 1786.480±0.00 N/A N/A N/A N/A N/A N/A N/A 1597.290±0.00 1105.969±264.55 290.949±0.00
ENSMUST00000161086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 63.804±0.00
ENSMUST00000161434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021578 ENSMUST00000022063 1.852±0.00 0.646±0.04 3.517±0.35 3.180±0.37 1.531±0.00 0.747±0.00 N/A 1.133±0.00 1.458±0.73 N/A 2.985±0.19 1.288±0.40 2.019±0.51 0.617±0.08
ENSMUST00000159931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.410±0.00 3.748±1.21
ENSMUST00000160021 N/A N/A N/A 1.883±0.03 N/A 0.937±0.11 N/A 1.129±0.16 1.027±0.29 N/A N/A 1.349±0.20 N/A N/A
ENSMUST00000162376 N/A N/A 7.615±0.00 30.141±0.00 N/A N/A N/A N/A N/A N/A N/A 26.744±10.72 21.962±14.47 8.391±8.27
ENSMUST00000162672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021579 ENSMUST00000022064 2.865±0.16 1.600±0.18 2.716±0.32 2.919±0.19 7.864±7.30 1.735±0.23 51.645±2.74 2.134±0.38 1.392±0.19 2.875±0.58 38.149±3.58 2.458±0.47 1.339±0.00 0.388±0.06
ENSMUSG00000090004 ENSMUST00000159003 0.243±0.03 N/A 0.451±0.00 0.380±0.20 N/A N/A 0.195±0.00 0.200±0.01 0.110±0.05 0.253±0.00 0.228±0.00 0.691±0.50 0.302±0.06 0.312±0.13

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