C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000JS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102243-ENSG00000102245 CGP 9606 X:136532152-136660390
GeneTranscriptPositionBiotype
ENSG00000102243 (VGLL1)
vestigial-like family member 1 		ENST00000370634 (VGLL1-001) 136532152-136556807 protein_coding
ENST00000440515 (VGLL1-002) 136536128-136556496 protein_coding
ENST00000456412 (VGLL1-004) 136536195-136556807 protein_coding
ENST00000470358 (VGLL1-003) 136550442-136556807 processed_transcript
ENSG00000102245 (CD40LG)
CD40 ligand 		ENST00000370628 (CD40LG-002) 136648227-136660390 protein_coding
ENST00000370629 (CD40LG-001) 136648193-136660390 protein_coding
ENSG00000233093 (LINC00892)
long intergenic non-protein coding RNA 892 		ENST00000427517 (LINC00892-001) 136639740-136642429 retained_intron
ENST00000429841 (LINC00892-003) 136639667-136642426 antisense
ENST00000454385 (LINC00892-002) 136639543-136642426 antisense
CIL_0000JS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031131-ENSMUSG00000031132 CGP 10090 X:57088106-57224042
GeneTranscriptPositionBiotype
ENSMUSG00000031131 (Vgll1)
vestigial like 1 homolog (Drosophila) 		ENSMUST00000033465 (Vgll1-001) 57088106-57106540 protein_coding
ENSMUST00000114745 (Vgll1-201) 57089312-57105529 protein_coding
ENSMUST00000114746 (Vgll1-202) 57089374-57106540 protein_coding
ENSMUST00000141936 (Vgll1-002) 57099586-57102061 protein_coding
ENSMUSG00000031132 (Cd40lg)
CD40 ligand 		ENSMUST00000033466 (Cd40lg-001) 57212143-57224042 protein_coding
ENSMUSG00000085808 (Gm14718)
predicted gene 14718 		ENSMUST00000138082 (Gm14718-001) 57200643-57204378 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JS_0001ENSG00000102243ENST00000370634ENST00000440515ENST00000456412ENST00000470358ENSG00000102245ENST00000370628ENST00000370629ENSG00000233093ENST00000427517ENST00000429841ENST00000454385CIL_0000JS_0002ENSMUSG00000031131ENSMUST00000033465ENSMUST00000114745ENSMUST00000114746ENSMUST00000141936ENSMUSG00000031132ENSMUST00000033466ENSMUSG00000085808ENSMUST00000138082
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JS_0001ENSG00000102243ENST00000370634ENST00000440515ENST00000456412ENSG00000102245ENST00000370628ENST00000370629ENSG00000233093ENST00000427517ENST00000429841ENST00000454385CIL_0000JS_0002ENSMUSG00000031131ENSMUST00000033465ENSMUST00000114745ENSMUST00000114746ENSMUST00000141936ENSMUSG00000031132ENSMUST00000033466ENSMUSG00000085808ENSMUST00000138082
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102243 ENST00000370634 N/A N/A 0.135±0.00 0.017±0.00 0.639±0.60 N/A N/A 2.204±0.00 0.677±0.00 0.025±0.00 N/A 0.200±0.14 167.961±96.21 0.030±0.01
ENST00000440515 N/A N/A N/A N/A N/A N/A N/A N/A 0.148±0.00 N/A N/A N/A N/A N/A
ENST00000456412 N/A N/A N/A N/A N/A N/A N/A 1.230±0.00 N/A N/A 2.224±0.00 0.329±0.14 N/A 0.070±0.00
ENST00000470358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000102245 ENST00000370628 N/A N/A 0.581±0.00 0.058±0.03 0.164±0.10 0.049±0.00 0.076±0.00 0.052±0.03 N/A 2.055±0.00 0.110±0.00 0.276±0.23 0.089±0.00 0.084±0.05
ENST00000370629 0.113±0.00 1.744±0.00 N/A N/A N/A 0.619±0.00 0.059±0.00 N/A 0.362±0.23 1.059±0.00 N/A 0.263±0.08 0.062±0.00 N/A
ENSG00000233093 ENST00000427517 N/A 0.172±0.00 N/A N/A 0.039±0.02 0.050±0.00 N/A 0.046±0.00 0.033±0.00 0.497±0.00 N/A 0.067±0.03 N/A 0.028±0.00
ENST00000429841 N/A N/A N/A 0.172±0.00 N/A N/A N/A 0.026±0.00 0.023±0.00 0.865±0.00 N/A 0.271±0.03 0.545±0.44 0.028±0.00
ENST00000454385 N/A 0.188±0.00 N/A N/A N/A 0.200±0.00 N/A 0.089±0.00 0.266±0.00 N/A N/A 0.134±0.00 0.181±0.03 0.019±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031131 ENSMUST00000033465 N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.609±0.92 N/A
ENSMUST00000114745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A 0.065±0.00
ENSMUST00000114746 N/A N/A 0.043±0.00 0.005±0.00 N/A 0.041±0.00 0.013±0.00 N/A 0.012±0.01 N/A N/A 0.036±0.01 2.439±2.18 0.073±0.04
ENSMUST00000141936 N/A N/A N/A N/A N/A 0.119±0.00 N/A 0.140±0.00 N/A N/A N/A 0.293±0.12 N/A N/A
ENSMUSG00000031132 ENSMUST00000033466 0.086±0.05 0.109±0.00 0.056±0.00 N/A 1.929±0.46 0.216±0.09 0.076±0.02 0.130±0.08 0.075±0.05 0.252±0.04 0.100±0.00 0.076±0.06 0.022±0.00 0.107±0.04
ENSMUSG00000085808 ENSMUST00000138082 N/A N/A N/A N/A 0.146±0.04 N/A N/A N/A N/A N/A 0.038±0.00 0.037±0.00 0.008±0.00 N/A

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