C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000LZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000031751-ENSDARG00000016811 CGP 7955 19:26909255-27159524
GeneTranscriptPositionBiotype
ENSDARG00000016811 (ints3)
integrator complex subunit 3 		ENSDART00000067793 (ints3-001) 27125761-27159520 protein_coding
ENSDART00000124755 (ints3-201) 27125761-27159524 protein_coding
ENSDARG00000031751 (npr1a)
natriuretic peptide receptor 1a 		ENSDART00000041298 (npr1a-201) 26910399-27112978 protein_coding
ENSDART00000136244 (npr1a-001) 26909255-27114782 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000LZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169418-ENSG00000143624 CGP 9606 1:153678637-153774808
GeneTranscriptPositionBiotype
ENSG00000143624 (INTS3)
integrator complex subunit 3 		ENST00000318967 (INTS3-001) 153728067-153774808 protein_coding
ENST00000368669 (INTS3-006) 153766831-153774079 retained_intron
ENST00000368670 (INTS3-005) 153766475-153774079 retained_intron
ENST00000435409 (INTS3-008) 153728091-153773535 protein_coding
ENST00000476843 (INTS3-003) 153751135-153774079 nonsense_mediated_decay
ENST00000480659 (INTS3-007) 153752077-153760902 retained_intron
ENST00000481797 (INTS3-002) 153728483-153774079 retained_intron
ENST00000491790 (INTS3-004) 153759674-153762840 retained_intron
ENST00000503133 (INTS3-010) 153757637-153773319 nonsense_mediated_decay
ENST00000512605 (INTS3-009) 153750854-153773728 protein_coding
ENST00000624515 (INTS3-011) 153773034-153774808 nonsense_mediated_decay
ENSG00000169418 (NPR1)
natriuretic peptide receptor 1 		ENST00000368677 (NPR1-002) 153688724-153693968 retained_intron
ENST00000368680 (NPR1-001) 153678637-153693992 protein_coding
ENST00000413826 (NPR1-003) 153680801-153681792 processed_transcript
ENSG00000235015 (GEMIN2P1)
gem (nuclear organelle) associated protein 2 pseudogene 1 		ENST00000454246 (GEMIN2P1-001) 153717303-153718347 processed_pseudogene
ENSG00000242565 (RN7SL372P)
RNA, 7SL, cytoplasmic 372, pseudogene 		ENST00000461982 (RN7SL372P-201) 153704088-153704385 misc_RNA
ENSG00000274940 (MIR8083)
microRNA 8083 		ENST00000620823 (MIR8083-201) 153689705-153689793 miRNA
ENSG00000279767 (AL513523.2)
 ENST00000623024 (AL513523.2-201) 153772371-153774079 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LZ_0001ENSDARG00000016811ENSDART00000067793ENSDART00000124755ENSDARG00000031751ENSDART00000041298ENSDART00000136244CIL_0000LZ_0002ENSG00000143624ENST00000318967ENST00000368669ENST00000368670ENST00000435409ENST00000476843ENST00000480659ENST00000481797ENST00000491790ENST00000503133ENST00000512605ENST00000624515ENSG00000169418ENST00000368677ENST00000368680ENST00000413826ENSG00000235015ENST00000454246ENSG00000242565ENST00000461982ENSG00000274940ENST00000620823ENSG00000279767ENST00000623024
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LZ_0001ENSDARG00000016811ENSDART00000067793ENSDART00000124755ENSDARG00000031751ENSDART00000041298ENSDART00000136244CIL_0000LZ_0002ENSG00000143624ENST00000318967ENST00000435409ENST00000481797ENST00000503133ENSG00000169418ENST00000368677ENST00000368680ENSG00000235015ENST00000454246ENSG00000242565ENST00000461982ENSG00000274940ENST00000620823ENSG00000279767ENST00000623024
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016811 ENSDART00000067793 N/A N/A N/A 3.172±2.83 N/A N/A 3.652±0.00 9.097±0.00 1.115±0.00 N/A 1.704±0.00 N/A N/A N/A
ENSDART00000124755 N/A N/A N/A 0.299±0.00 N/A N/A N/A 0.150±0.00 N/A N/A 0.385±0.00 N/A N/A N/A
ENSDARG00000031751 ENSDART00000041298 N/A N/A N/A N/A N/A N/A 1.197±1.33 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136244 N/A N/A N/A 1.244±0.54 N/A N/A 0.499±0.31 0.783±0.03 0.052±0.00 N/A 0.985±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143624 ENST00000318967 N/A N/A N/A N/A N/A N/A 1.223±0.00 6.498±0.00 1.667±0.00 N/A 1.095±0.79 2.114±0.00 2.285±0.09 N/A
ENST00000368669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000368670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435409 6.747±0.00 N/A 2.604±0.00 4.625±1.10 6.294±0.00 3.544±1.71 2.739±1.40 9.105±7.29 2.966±0.00 4.367±0.00 3.014±1.72 11.561±6.25 7.653±3.05 11.235±1.54
ENST00000476843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481797 N/A N/A N/A 1.983±0.07 1.750±0.65 1.514±0.00 0.869±0.17 1.869±0.00 N/A N/A 0.480±0.00 4.705±1.62 N/A 9.784±0.00
ENST00000491790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503133 N/A N/A N/A N/A N/A 5.603±0.00 N/A N/A N/A 7.661±0.00 N/A 13.673±0.00 9.574±0.00 13.560±0.03
ENST00000512605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169418 ENST00000368677 N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A 6.704±0.00 N/A N/A
ENST00000368680 43.457±0.00 13.103±0.00 2.216±0.00 0.404±0.00 30.961±27.21 14.508±12.61 3.511±1.64 19.523±17.94 5.717±1.46 14.098±9.11 1.472±0.00 15.343±18.15 21.749±4.27 4.872±4.66
ENST00000413826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235015 ENST00000454246 N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242565 ENST00000461982 N/A 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274940 ENST00000620823 0.913±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279767 ENST00000623024 19.082±0.00 36.833±0.00 5.125±0.00 9.654±4.03 20.349±0.00 9.118±4.36 5.238±2.72 29.345±22.71 20.035±0.00 15.408±1.76 6.256±3.33 40.336±24.96 16.666±0.96 30.155±0.00

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