C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scratch homolog 2, zinc finger protein (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000053782 scrt2-201 ENSDARG00000056175 7955 + 8:29375632-29382076 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleENSDART00000053782
Transcript ID Heart Kidney Muscle
ENSDART00000053782 0.023±0.00 0.074±0.00 0.289±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PI CIL_0000PI_0001 CGP 8:29321021-29382076
CIL_0000NP CIL_0000NP_0001 CGP 8:29375632-29398800

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0043516 IGI regulation of DNA damage response, signal transduction by p53 class mediator
GO:0043523 IMP regulation of neuron apoptotic process
GO:0046872 IEA metal ion binding
GO:2000177 IGI regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000569446 SCRT1-001 protein_coding Homo_sapiens 0 412

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