C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000OG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008969-ENSDARG00000020741 CGP 7955 1:9127847-9147623
GeneTranscriptPositionBiotype
ENSDARG00000008969 (fgb)
fibrinogen, B beta polypeptide 		ENSDART00000011701 (fgb-001) 9127847-9135580 protein_coding
ENSDART00000133465 (fgb-002) 9130103-9133892 processed_transcript
ENSDART00000134835 (fgb-003) 9127858-9130855 processed_transcript
ENSDART00000139358 (fgb-005) 9130492-9131387 retained_intron
ENSDART00000144756 (fgb-004) 9127868-9134141 processed_transcript
ENSDARG00000020741 (fga)
fibrinogen alpha chain 		ENSDART00000033118 (fga-001) 9142184-9147623 protein_coding
ENSDART00000134913 (fga-004) 9142963-9147515 processed_transcript
ENSDART00000135522 (fga-002) 9142184-9147506 protein_coding
ENSDART00000135676 (fga-003) 9142315-9147506 processed_transcript
ENSDART00000147106 (fga-006) 9139585-9140652 processed_transcript
ENSDART00000148074 (fga-005) 9139958-9144617 processed_transcript
CIL_0000OG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171564-ENSG00000171560 CGP 9606 4:154562956-154590766
GeneTranscriptPositionBiotype
ENSG00000171560 (FGA)
fibrinogen alpha chain 		ENST00000302053 (FGA-002) 154583126-154590766 protein_coding
ENST00000403106 (FGA-001) 154585260-154590766 protein_coding
ENST00000622532 (FGA-201) 154585281-154590744 protein_coding
ENSG00000171564 (FGB)
fibrinogen beta chain 		ENST00000302068 (FGB-001) 154562956-154571086 protein_coding
ENST00000425838 (FGB-003) 154563017-154567615 nonsense_mediated_decay
ENST00000473984 (FGB-005) 154565781-154567854 retained_intron
ENST00000497097 (FGB-004) 154563012-154566749 retained_intron
ENST00000498375 (FGB-002) 154563011-154566522 retained_intron
ENST00000502545 (FGB-011) 154563038-154570799 processed_transcript
ENST00000509493 (FGB-010) 154563026-154570721 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OG_0001ENSDARG00000008969ENSDART00000011701ENSDART00000133465ENSDART00000134835ENSDART00000139358ENSDART00000144756ENSDARG00000020741ENSDART00000033118ENSDART00000134913ENSDART00000135522ENSDART00000135676ENSDART00000147106ENSDART00000148074CIL_0000OG_0002ENSG00000171560ENST00000302053ENST00000403106ENST00000622532ENSG00000171564ENST00000302068ENST00000425838ENST00000473984ENST00000497097ENST00000498375ENST00000502545ENST00000509493
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OG_0001ENSDARG00000008969ENSDART00000011701ENSDARG00000020741ENSDART00000033118ENSDART00000135522ENSDART00000135676CIL_0000OG_0002ENSG00000171560ENST00000302053ENST00000403106ENST00000622532ENSG00000171564ENST00000302068ENST00000425838ENST00000473984ENST00000497097ENST00000498375ENST00000502545ENST00000509493
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008969 ENSDART00000011701 N/A N/A N/A 8.813±8.76 N/A N/A 25.012±2.64 767.870±120.85 1968.140±0.00 N/A 83.391±0.00 N/A N/A N/A
ENSDART00000133465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000020741 ENSDART00000033118 N/A N/A N/A 2.461±2.36 N/A N/A 2.971±1.32 100.852±0.00 353.236±0.00 N/A 14.838±0.00 N/A N/A N/A
ENSDART00000134913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135522 N/A N/A N/A 9.008±0.00 N/A N/A 12.702±15.25 478.768±274.33 1308.440±0.00 N/A 52.710±0.00 N/A N/A N/A
ENSDART00000135676 N/A N/A N/A 0.206±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171560 ENST00000302053 N/A N/A 0.096±0.00 0.025±0.02 0.347±0.34 0.005±0.00 0.022±0.00 143.510±140.45 N/A N/A 0.009±0.00 0.048±0.01 0.280±0.01 0.113±0.03
ENST00000403106 0.097±0.00 0.076±0.00 0.298±0.00 0.162±0.13 2.884±2.84 0.056±0.00 0.073±0.00 1375.122±1334.93 0.387±0.00 3.477±3.08 0.242±0.23 0.301±0.05 1.700±0.83 1.294±0.00
ENST00000622532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.253±0.22 0.049±0.00 N/A N/A
ENSG00000171564 ENST00000302068 0.044±0.00 N/A 2.847±0.00 0.120±0.10 4.198±0.00 0.020±0.00 0.081±0.00 927.795±878.91 0.128±0.00 N/A N/A 0.156±0.14 0.457±0.23 0.151±0.00
ENST00000425838 N/A N/A N/A 0.317±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473984 N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A 0.312±0.00 0.215±0.00 0.109±0.00 N/A N/A N/A
ENST00000497097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.349±0.00 N/A N/A
ENST00000498375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.108±0.00
ENST00000502545 N/A N/A 2.198±0.00 N/A 0.087±0.00 N/A 0.051±0.00 N/A 0.078±0.00 0.184±0.00 0.034±0.00 0.079±0.04 0.574±0.00 N/A
ENST00000509493 N/A 0.117±0.00 N/A 0.159±0.08 N/A 0.067±0.04 0.094±0.00 75.006±0.00 N/A 0.307±0.13 0.109±0.10 0.227±0.20 0.308±0.04 0.102±0.06

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