C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000PW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000057287-ENSDARG00000075230 CGP 7955 13:18228069-18344901
GeneTranscriptPositionBiotype
ENSDARG00000057287 (slc25a16)
solute carrier family 25, member 16 		ENSDART00000079902 (slc25a16-001) 18228069-18244915 protein_coding
ENSDARG00000075230 (tet1)
tet methylcytosine dioxygenase 1 		ENSDART00000109642 (tet1-201) 18251676-18344901 protein_coding
ENSDART00000141009 (tet1-001) 18325160-18343199 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000PW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122912-ENSG00000138336 CGP 9606 10:68477999-68694482
GeneTranscriptPositionBiotype
ENSG00000122912 (SLC25A16)
solute carrier family 25 (mitochondrial carrier), member 16 		ENST00000265870 (SLC25A16-001) 68483019-68518218 processed_transcript
ENST00000439904 (SLC25A16-006) 68477999-68480764 processed_transcript
ENST00000474927 (SLC25A16-004) 68493174-68506605 nonsense_mediated_decay
ENST00000491102 (SLC25A16-005) 68506627-68527416 nonsense_mediated_decay
ENST00000493963 (SLC25A16-003) 68483475-68527438 nonsense_mediated_decay
ENST00000608053 (SLC25A16-007) 68487074-68488590 protein_coding
ENST00000609923 (SLC25A16-002) 68478001-68527474 protein_coding
ENSG00000138336 (TET1)
tet methylcytosine dioxygenase 1 		ENST00000373644 (TET1-001) 68560656-68694482 protein_coding
ENSG00000207438 (Y_RNA)
Y RNA 		ENST00000384707 (Y_RNA.1-765) 68503152-68503259 misc_RNA
ENSG00000213025 (COX20P1)
COX20 cytochrome C oxidase assembly factor pseudogene 1 		ENST00000366529 (COX20P1-001) 68632371-68632727 processed_pseudogene
ENSG00000214881 (TMEM14D)
transmembrane protein 14D (pseudogene) 		ENST00000422205 (TMEM14D-001) 68544489-68544833 processed_pseudogene
ENSG00000226493 (RP11-524O24.2)
 ENST00000414397 (RP11-524O24.2-001) 68499532-68499968 processed_pseudogene
ENSG00000227583 (RP11-119F7.3)
 ENST00000419176 (RP11-119F7.3-001) 68674356-68675100 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PW_0001ENSDARG00000057287ENSDART00000079902ENSDARG00000075230ENSDART00000109642ENSDART00000141009CIL_0000PW_0002ENSG00000122912ENST00000265870ENST00000439904ENST00000474927ENST00000491102ENST00000493963ENST00000608053ENST00000609923ENSG00000138336ENST00000373644ENSG00000207438ENST00000384707ENSG00000213025ENST00000366529ENSG00000214881ENST00000422205ENSG00000226493ENST00000414397ENSG00000227583ENST00000419176
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PW_0001ENSDARG00000057287ENSDART00000079902ENSDARG00000075230ENSDART00000109642ENSDART00000141009CIL_0000PW_0002ENSG00000122912ENST00000265870ENST00000493963ENST00000609923ENSG00000138336ENST00000373644ENSG00000207438ENST00000384707ENSG00000213025ENST00000366529ENSG00000214881ENST00000422205ENSG00000226493ENST00000414397ENSG00000227583ENST00000419176
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000057287 ENSDART00000079902 N/A N/A N/A 6.276±1.28 N/A N/A 10.037±3.91 7.199±3.91 3.225±0.00 N/A 6.261±0.00 N/A N/A N/A
ENSDARG00000075230 ENSDART00000109642 N/A N/A N/A 3.014±0.00 N/A N/A 0.195±0.00 N/A 0.230±0.00 N/A 0.412±0.00 N/A N/A N/A
ENSDART00000141009 N/A N/A N/A 1.449±0.00 N/A N/A N/A N/A N/A N/A 0.231±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122912 ENST00000265870 N/A 2.441±0.00 1.335±0.00 2.074±0.00 2.244±0.00 1.724±0.00 0.659±0.20 2.936±0.11 2.256±0.00 1.993±1.49 0.508±0.00 3.084±1.54 1.498±0.00 N/A
ENST00000439904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493963 N/A N/A 1.291±0.00 8.732±0.00 2.555±0.00 2.411±0.00 1.005±0.34 N/A N/A 1.376±0.00 1.390±0.00 N/A 1.638±0.50 N/A
ENST00000608053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609923 3.477±0.00 1.409±0.00 0.488±0.00 1.678±0.55 6.240±5.31 0.795±0.00 0.479±0.25 2.235±0.24 2.829±0.00 0.588±0.01 0.455±0.38 1.369±0.49 1.343±0.51 0.987±0.11
ENSG00000138336 ENST00000373644 0.181±0.00 0.190±0.00 0.236±0.00 0.344±0.15 0.229±0.05 0.247±0.07 0.053±0.00 0.338±0.20 0.388±0.31 0.097±0.06 0.006±0.00 0.124±0.05 0.139±0.06 0.176±0.12
ENSG00000207438 ENST00000384707 N/A N/A N/A N/A N/A N/A N/A N/A 0.137±0.00 N/A N/A N/A N/A N/A
ENSG00000213025 ENST00000366529 N/A N/A N/A 0.034±0.00 0.127±0.00 0.029±0.00 0.033±0.00 0.065±0.00 N/A N/A N/A 0.073±0.00 0.478±0.00 0.149±0.00
ENSG00000214881 ENST00000422205 N/A 0.096±0.00 N/A N/A 0.048±0.00 0.044±0.00 N/A 0.048±0.00 0.043±0.00 N/A N/A N/A N/A 0.046±0.00
ENSG00000226493 ENST00000414397 0.200±0.00 0.419±0.00 0.730±0.00 0.248±0.16 0.176±0.00 N/A 0.250±0.00 0.119±0.00 0.322±0.17 0.271±0.00 1.425±0.93 0.163±0.01 N/A 0.186±0.00
ENSG00000227583 ENST00000419176 0.059±0.00 0.090±0.00 N/A 0.058±0.00 0.167±0.02 0.067±0.00 0.065±0.04 0.087±0.00 0.074±0.06 0.347±0.31 0.026±0.00 0.048±0.01 N/A 0.053±0.00

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