C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414397 RP11-524O24.2-001 ENSG00000226493 9606 + 10:68499532-68499968 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryTestisENST00000414397
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000414397 0.200±0.00 0.419±0.00 0.730±0.00 0.248±0.16 0.176±0.00 0.250±0.00 0.119±0.00 0.322±0.17 0.271±0.00 1.425±0.93 0.163±0.01 0.186±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PW CIL_0000PW_0002 CGP 10:68477999-68694482

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167436 Rpl26-201 protein_coding Mus_musculus 0 363
ENSMUST00000073471 Rpl26-001 protein_coding Mus_musculus 0 363
ENSMUST00000118533 Gm15772-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000183196 Gm10136-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000118781 Gm11826-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000101014 Rpl26-002 protein_coding Mus_musculus 0 329
ENSMUST00000085379 Rpl26-ps2-201 processed_pseudogene Mus_musculus 0 324
ENSMUST00000170279 Rpl26-ps4-201 processed_pseudogene Mus_musculus 0 318
ENSMUST00000122220 Rpl26-ps5-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000118045 Gm15896-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000128952 Rpl26-003 protein_coding Mus_musculus 0 250
ENSMUST00000122414 Gm11506-001 processed_pseudogene Mus_musculus 0 220

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