C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000RU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000142484-ENSG00000182853 CGP 9606 17:4771884-4786433
GeneTranscriptPositionBiotype
ENSG00000142484 (TM4SF5)
transmembrane 4 L six family member 5
ENST00000270560 (TM4SF5-001) 4771892-4783211 protein_coding
ENST00000576530 (TM4SF5-002) 4771884-4783213 retained_intron
ENSG00000182853 (VMO1)
vitelline membrane outer layer 1 homolog (chicken)
ENST00000328739 (VMO1-001) 4785285-4786432 protein_coding
ENST00000354194 (VMO1-002) 4785285-4786433 protein_coding
ENST00000416307 (VMO1-003) 4785285-4786398 protein_coding
ENST00000441199 (VMO1-004) 4785285-4786371 protein_coding
CIL_0000RU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018919-ENSMUSG00000020830 CGP 10090 11:70505244-70514616
GeneTranscriptPositionBiotype
ENSMUSG00000018919 (Tm4sf5)
transmembrane 4 superfamily member 5
ENSMUST00000019063 (Tm4sf5-001) 70505244-70511178 protein_coding
ENSMUST00000141924 (Tm4sf5-002) 70510206-70510967 retained_intron
ENSMUST00000179986 (Tm4sf5-003) 70509970-70510882 processed_transcript
ENSMUSG00000020830 (Vmo1)
vitelline membrane outer layer 1 homolog (chicken)
ENSMUST00000021179 (Vmo1-001) 70513516-70514616 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000RU_0001ENSG00000142484ENST00000270560ENST00000576530ENSG00000182853ENST00000328739ENST00000354194ENST00000416307ENST00000441199CIL_0000RU_0002ENSMUSG00000018919ENSMUST00000019063ENSMUST00000141924ENSMUST00000179986ENSMUSG00000020830ENSMUST00000021179
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000RU_0001ENSG00000142484ENST00000270560ENST00000576530ENSG00000182853ENST00000328739ENST00000354194ENST00000416307ENST00000441199CIL_0000RU_0002ENSMUSG00000018919ENSMUST00000019063ENSMUST00000141924ENSMUST00000179986ENSMUSG00000020830ENSMUST00000021179
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142484 ENST00000270560 N/A N/A 0.138±0.00 N/A 0.119±0.00 2.926±0.68 N/A 4.853±0.38 214.032±0.00 N/A N/A 6.316±5.88 2.032±0.89 0.122±0.00
ENST00000576530 N/A N/A N/A N/A N/A 0.318±0.00 N/A 1.246±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000182853 ENST00000328739 3.146±0.00 N/A N/A N/A N/A N/A N/A 1.474±0.00 1.382±0.00 6.172±0.00 N/A 0.770±0.42 2.605±1.47 0.965±0.00
ENST00000354194 N/A N/A N/A 0.309±0.00 0.219±0.00 0.339±0.00 N/A 0.901±0.57 N/A 0.531±0.00 0.622±0.00 N/A 0.095±0.00 N/A
ENST00000416307 4.394±0.00 2.002±0.00 N/A N/A 0.374±0.00 N/A 0.354±0.00 N/A 3.889±0.00 9.271±0.00 N/A 1.347±0.00 1.389±0.62 0.617±0.00
ENST00000441199 N/A 0.889±0.00 N/A 1.599±0.00 1.119±0.00 1.067±0.00 N/A 0.225±0.00 0.867±0.00 N/A N/A 1.057±0.36 N/A 0.276±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018919 ENSMUST00000019063 0.477±0.06 0.291±0.06 0.178±0.07 N/A 0.608±0.26 1.667±0.23 0.891±0.06 0.106±0.00 0.780±0.39 0.442±0.31 N/A 1.847±0.63 4.886±5.40 0.052±0.00
ENSMUST00000141924 0.910±0.00 N/A 0.168±0.01 0.294±0.17 0.930±0.01 N/A N/A 0.129±0.02 0.257±0.10 0.293±0.00 N/A 0.589±0.00 0.277±0.22 0.874±0.42
ENSMUST00000179986 0.192±0.00 0.199±0.00 N/A 0.193±0.02 0.462±0.25 N/A N/A 0.045±0.00 N/A 0.207±0.00 N/A N/A N/A 0.674±0.39
ENSMUSG00000020830 ENSMUST00000021179 0.205±0.06 0.093±0.00 0.379±0.00 0.063±0.01 0.135±0.04 0.145±0.10 0.111±0.00 0.118±0.06 1.842±1.58 0.120±0.06 0.152±0.04 0.373±0.17 0.199±0.09 0.164±0.07

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