C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane 4 L six family member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000142484 TM4SF5 9606 + 17:4771884-4783213 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000270560 TM4SF5-001 4771892-4783211 protein_coding
  ENST00000576530 TM4SF5-002 4771884-4783213 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverOvaryPlacentaTestisENST00000270560ENST00000576530
Transcript ID Bladder Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000270560 0.138±0.00 0.119±0.00 2.926±0.68 4.853±0.38 214.032±0.00 6.316±5.88 2.032±0.89 0.122±0.00
ENST00000576530 N/A N/A 0.318±0.00 1.246±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RB CIL_0001RB_0001 CGP 17:4740015-4783213
CIL_0000RU CIL_0000RU_0001 CGP 17:4771884-4786433

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005887 TAS integral component of plasma membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055185 tm4sf5 transmembrane 4 L six family member 5 protein_coding Danio_rerio
ENSMUSG00000018919 Tm4sf5 transmembrane 4 superfamily member 5 protein_coding Mus_musculus

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