C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000SG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000277972-ENSG00000277258 CGP 9606 17:38730235-38749817
GeneTranscriptPositionBiotype
ENSG00000276036 (5S_rRNA)
5S ribosomal RNA 		ENST00000612665 (5S_rRNA.1-227) 38731802-38731920 rRNA
ENSG00000277972 (CISD3)
CDGSH iron sulfur domain 3 		ENST00000613478 (CISD3-002) 38730235-38735021 protein_coding
ENST00000616128 (CISD3-003) 38731107-38733715 retained_intron
ENST00000619858 (CISD3-001) 38730359-38735044 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0000SG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078695-ENSMUSG00000018537 CGP 10090 11:97685826-97700497
GeneTranscriptPositionBiotype
ENSMUSG00000018537 (Pcgf2)
polycomb group ring finger 2 		ENSMUST00000018681 (Pcgf2-001) 97689820-97700497 protein_coding
ENSMUST00000103148 (Pcgf2-002) 97689820-97699641 protein_coding
ENSMUST00000103149 (Pcgf2-005) 97689792-97692407 protein_coding
ENSMUST00000126185 (Pcgf2-003) 97697199-97699581 processed_transcript
ENSMUST00000134003 (Pcgf2-004) 97690528-97692409 processed_transcript
ENSMUST00000169807 (Pcgf2-201) 97688823-97699648 protein_coding
ENSMUST00000179765 (Pcgf2-202) 97688823-97699384 protein_coding
ENSMUSG00000078695 (Cisd3)
CDGSH iron sulfur domain 3 		ENSMUST00000107583 (Cisd3-001) 97685953-97688621 protein_coding
ENSMUST00000107584 (Cisd3-002) 97685826-97688621 protein_coding
ENSMUST00000107585 (Cisd3-003) 97685843-97688621 protein_coding
ENSMUST00000145623 (Cisd3-004) 97685977-97686215 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SG_0001ENSG00000276036ENST00000612665ENSG00000277972ENST00000613478ENST00000616128ENST00000619858CIL_0000SG_0002ENSMUSG00000018537ENSMUST00000018681ENSMUST00000103148ENSMUST00000103149ENSMUST00000126185ENSMUST00000134003ENSMUST00000169807ENSMUST00000179765ENSMUSG00000078695ENSMUST00000107583ENSMUST00000107584ENSMUST00000107585ENSMUST00000145623
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SG_0001ENSG00000276036ENST00000612665ENSG00000277972ENST00000613478ENST00000616128ENST00000619858CIL_0000SG_0002ENSMUSG00000018537ENSMUST00000018681ENSMUST00000103148ENSMUST00000103149ENSMUST00000134003ENSMUST00000169807ENSMUST00000179765ENSMUSG00000078695ENSMUST00000107583ENSMUST00000107584
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000276036 ENST00000612665 N/A N/A N/A 0.784±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000277972 ENST00000613478 N/A N/A N/A 0.830±0.00 0.281±0.00 N/A 0.526±0.00 1.975±0.00 N/A N/A N/A N/A N/A N/A
ENST00000616128 19.482±0.00 21.789±0.00 N/A 13.366±0.00 30.341±0.00 27.531±0.00 7.507±6.75 18.465±14.65 18.199±16.56 9.340±7.82 2.787±0.00 30.115±1.03 17.635±7.63 10.930±5.27
ENST00000619858 N/A N/A N/A N/A N/A N/A N/A N/A 2.444±2.13 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018537 ENSMUST00000018681 N/A 2.602±0.00 N/A N/A 2.050±0.00 3.295±0.68 N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A
ENSMUST00000103148 5.368±2.32 N/A 12.794±1.40 28.907±11.64 4.350±1.97 5.430±0.45 2.460±1.31 6.740±1.52 2.601±1.46 5.521±1.99 0.427±0.12 10.576±6.00 6.499±2.10 1.272±0.52
ENSMUST00000103149 N/A 18.576±3.41 N/A N/A 15.059±4.75 27.032±8.96 N/A 6.805±2.19 1.591±0.56 10.792±4.91 N/A 26.119±9.83 8.418±0.00 1.172±0.00
ENSMUST00000126185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.402±0.00 N/A N/A N/A
ENSMUST00000169807 2.825±1.56 3.170±0.54 7.386±0.45 15.492±4.95 2.952±1.13 5.101±0.78 1.001±0.20 4.066±0.52 1.109±0.89 3.752±1.50 0.304±0.15 6.508±1.72 1.765±0.96 0.613±0.00
ENSMUST00000179765 N/A 2.872±0.00 1.868±0.00 N/A N/A N/A 0.425±0.21 N/A N/A 2.535±0.00 N/A N/A N/A N/A
ENSMUSG00000078695 ENSMUST00000107583 34.514±13.28 21.527±3.02 23.647±5.37 2.405±0.65 26.359±8.37 59.654±7.95 23.432±6.53 42.946±6.01 18.404±10.21 12.460±2.45 32.932±5.57 10.125±3.88 3.894±2.57 5.029±2.55
ENSMUST00000107584 29.837±12.53 14.180±3.70 12.405±0.00 2.448±0.95 21.193±8.85 23.258±11.08 18.176±2.92 26.809±2.68 17.065±2.45 4.159±0.00 15.162±0.00 9.139±6.09 3.307±1.58 2.308±1.67
ENSMUST00000107585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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