C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CWC25 spliceosome-associated protein homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018685 Cwc25-001 ENSMUSG00000018541 10090 - 11:97745615-97766556 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018685
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018685 1.977±0.44 1.332±0.37 3.335±1.95 4.215±0.38 1.218±0.39 1.776±0.32 0.935±0.25 1.899±0.30 2.331±1.19 1.833±0.27 1.703±0.63 2.588±2.18 7.555±1.80 2.082±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SH CIL_0000SH_0002 CGP 11:97715157-97766556
CIL_00003Z CIL_00003Z_0002 CGP 11:97745481-97775918

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000611845 CWC25-007 retained_intron Homo_sapiens 0 230
ENST00000614790 CWC25-001 protein_coding Homo_sapiens 0 1434
ENST00000614868 CWC25-201 protein_coding Homo_sapiens 0 1434
ENST00000618122 CWC25-004 nonsense_mediated_decay Homo_sapiens 0 532
ENST00000619299 CWC25-003 nonsense_mediated_decay Homo_sapiens 0 1149
ENST00000619462 CWC25-009 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000619818 CWC25-002 processed_transcript Homo_sapiens 0 754
ENST00000622665 CWC25-006 nonsense_mediated_decay Homo_sapiens 0 512

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