C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000VZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167701-ENSG00000167700 CGP 9606 8:144502973-144511213
GeneTranscriptPositionBiotype
ENSG00000167700 (MFSD3)
major facilitator superfamily domain containing 3 		ENST00000301327 (MFSD3-001) 144509074-144511213 protein_coding
ENST00000526749 (MFSD3-003) 144509619-144510814 retained_intron
ENST00000528047 (MFSD3-002) 144509080-144511181 retained_intron
ENST00000534427 (MFSD3-004) 144510246-144511181 retained_intron
ENSG00000167701 (GPT)
glutamic-pyruvate transaminase (alanine aminotransferase) 		ENST00000354769 (GPT-005) 144504140-144504936 retained_intron
ENST00000394955 (GPT-201) 144504082-144507171 protein_coding
ENST00000527165 (GPT-003) 144503737-144506405 retained_intron
ENST00000527961 (GPT-007) 144504221-144505139 retained_intron
ENST00000528431 (GPT-001) 144502973-144507174 protein_coding
ENST00000531330 (GPT-006) 144504140-144504836 retained_intron
ENST00000534702 (GPT-004) 144504140-144506125 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0000VZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022546-ENSMUSG00000019080 CGP 10090 15:76696764-76704239
GeneTranscriptPositionBiotype
ENSMUSG00000019080 (Mfsd3)
major facilitator superfamily domain containing 3 		ENSMUST00000019224 (Mfsd3-201) 76701542-76704239 protein_coding
ENSMUSG00000022546 (Gpt)
glutamic pyruvic transaminase, soluble 		ENSMUST00000023203 (Gpt-201) 76696764-76699674 protein_coding
ENSMUSG00000033762 (Recql4)
RecQ protein-like 4 		ENSMUST00000036852 (Recql4-201) 76703553-76710559 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VZ_0001ENSG00000167700ENST00000301327ENST00000526749ENST00000528047ENST00000534427ENSG00000167701ENST00000354769ENST00000394955ENST00000527165ENST00000527961ENST00000528431ENST00000531330ENST00000534702CIL_0000VZ_0002ENSMUSG00000019080ENSMUST00000019224ENSMUSG00000022546ENSMUST00000023203ENSMUSG00000033762ENSMUST00000036852
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VZ_0001ENSG00000167700ENST00000301327ENST00000528047ENSG00000167701ENST00000354769ENST00000394955ENST00000527165ENST00000527961ENST00000528431ENST00000534702CIL_0000VZ_0002ENSMUSG00000019080ENSMUST00000019224ENSMUSG00000022546ENSMUST00000023203ENSMUSG00000033762ENSMUST00000036852
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167700 ENST00000301327 3.288±0.00 4.218±0.00 0.552±0.00 7.126±0.00 5.987±5.47 2.562±0.00 6.363±0.00 8.550±7.15 8.768±0.00 1.244±0.99 2.481±1.25 8.343±2.91 8.470±1.95 4.750±0.29
ENST00000526749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528047 N/A N/A N/A 0.457±0.00 N/A N/A N/A N/A N/A 1.412±0.00 0.891±0.00 0.329±0.00 N/A 1.479±0.32
ENST00000534427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167701 ENST00000354769 N/A N/A N/A N/A N/A N/A N/A 17.649±0.00 N/A N/A N/A N/A N/A N/A
ENST00000394955 N/A N/A N/A N/A N/A 1.617±0.00 8.414±0.00 11.230±0.00 19.943±0.00 N/A 2.215±0.33 N/A N/A N/A
ENST00000527165 N/A N/A N/A N/A 0.566±0.00 N/A 1.258±0.00 6.750±0.00 N/A N/A N/A N/A N/A N/A
ENST00000527961 N/A N/A 2.190±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528431 3.302±0.00 N/A N/A N/A 9.569±0.00 2.417±0.00 N/A 6.004±0.00 21.100±0.00 N/A 3.706±0.00 N/A N/A N/A
ENST00000531330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534702 N/A N/A N/A N/A N/A 2.494±0.00 N/A N/A N/A 0.420±0.00 4.552±0.00 0.999±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019080 ENSMUST00000019224 5.795±0.80 20.050±4.30 3.616±0.69 2.007±1.29 8.060±3.41 4.366±1.30 3.265±0.66 4.950±1.43 6.359±2.66 3.945±0.39 2.968±1.06 7.071±3.60 1.558±0.16 2.236±0.07
ENSMUSG00000022546 ENSMUST00000023203 89.546±47.20 16.696±2.96 24.422±3.03 5.347±2.56 45.308±16.12 18.806±4.22 8.627±2.38 6.439±1.47 74.154±72.48 21.076±5.28 6.083±1.71 6.732±3.17 0.897±0.42 0.805±0.31
ENSMUSG00000033762 ENSMUST00000036852 1.475±0.41 N/A 0.632±0.12 2.026±1.68 1.327±0.35 1.472±0.59 0.319±0.03 0.415±0.00 6.592±6.89 0.669±0.04 0.175±0.00 2.200±0.75 1.382±0.85 4.812±2.08

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