C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RecQ protein-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036852 Recql4-201 ENSMUSG00000033762 10090 - 15:76703553-76710559 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036852
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036852 1.475±0.41 0.632±0.12 2.026±1.68 1.327±0.35 1.472±0.59 0.319±0.03 0.415±0.00 6.592±6.89 0.669±0.04 0.175±0.00 2.200±0.75 1.382±0.85 4.812±2.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_0000VZ CIL_0000VZ_0002 CGP 15:76696764-76704239
CIL_0000VY CIL_0000VY_0002 CGP 15:76701542-76710559
CIL_0000VX CIL_0000VX_0002 CGP 15:76703553-76717699

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IMP skeletal system development
GO:0003676 IEA nucleic acid binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0006260 ISS DNA replication
GO:0006310 IEA DNA recombination
GO:0008026 IEA ATP-dependent helicase activity
GO:0008270 IEA zinc ion binding
GO:0008284 IMP positive regulation of cell proliferation
GO:0043473 IMP pigmentation
GO:0045875 IMP negative regulation of sister chromatid cohesion
GO:0048705 IMP skeletal system morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000531875 RECQL4-011 protein_coding Homo_sapiens 0 446
ENST00000534626 RECQL4-008 protein_coding Homo_sapiens 0 207
ENST00000617875 RECQL4-002 protein_coding Homo_sapiens 0 555
ENST00000621189 RECQL4-001 protein_coding Homo_sapiens 0 555

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