C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamic-pyruvate transaminase (alanine aminotransferase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394955 GPT-201 ENSG00000167701 9606 + 8:144504082-144507171 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLiverMuscleENST00000394955
Transcript ID Colon Heart Kidney Liver Muscle
ENST00000394955 1.617±0.00 8.414±0.00 11.230±0.00 19.943±0.00 2.215±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000W0 CIL_0000W0_0001 CGP 8:144477969-144507174
CIL_0000VZ CIL_0000VZ_0001 CGP 8:144502973-144511213

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004021 NAS L-alanine:2-oxoglutarate aminotransferase activity
GO:0005829 TAS cytosol
GO:0008652 TAS cellular amino acid biosynthetic process
GO:0009058 IEA biosynthetic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042853 IEA L-alanine catabolic process
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023203 Gpt-201 protein_coding Mus_musculus 0 1371
ENSMUST00000034136 Gpt2-001 protein_coding Mus_musculus 0 259
ENSMUST00000132932 Gpt2-002 nonsense_mediated_decay Mus_musculus 4.06377e-44 183
ENSMUST00000140189 Gpt2-004 retained_intron Mus_musculus 2e-33 148

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