C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000XZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079672-ENSDARG00000006474 CGP 7955 7:12959881-13199130
GeneTranscriptPositionBiotype
ENSDARG00000006474 (fam154b)
family with sequence similarity 154, member B 		ENSDART00000053860 (fam154b-001) 13189986-13199130 protein_coding
ENSDARG00000079672 (EFTUD1)
elongation factor Tu GTP binding domain containing 1 		ENSDART00000113905 (EFTUD1-201) 12959881-13189936 protein_coding
ENSDARG00000082308 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000117142 (5S_rRNA.189-201) 12991054-12991171 rRNA
CIL_0000XZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140598-ENSG00000188659 CGP 9606 15:82130230-82284930
GeneTranscriptPositionBiotype
ENSG00000140598 (EFTUD1)
elongation factor Tu GTP binding domain containing 1 		ENST00000268206 (EFTUD1-002) 82130230-82262763 protein_coding
ENST00000359445 (EFTUD1-001) 82130233-82262714 protein_coding
ENST00000557844 (EFTUD1-004) 82261688-82262661 protein_coding
ENST00000557939 (EFTUD1-006) 82238308-82252759 protein_coding
ENST00000558974 (EFTUD1-005) 82261729-82262464 protein_coding
ENST00000559429 (EFTUD1-008) 82157466-82163957 retained_intron
ENST00000560095 (EFTUD1-009) 82214783-82215663 processed_transcript
ENST00000561331 (EFTUD1-007) 82227466-82233774 processed_transcript
ENST00000561340 (EFTUD1-010) 82152157-82160070 processed_transcript
ENST00000561389 (EFTUD1-003) 82238454-82262734 nonsense_mediated_decay
ENSG00000188659 (FAM154B)
family with sequence similarity 154, member B 		ENST00000339465 (FAM154B-001) 82262811-82284930 protein_coding
ENST00000562097 (FAM154B-007) 82262827-82264881 processed_transcript
ENST00000565006 (FAM154B-008) 82263144-82264889 processed_transcript
ENST00000565432 (FAM154B-005) 82262844-82272094 protein_coding
ENST00000565501 (FAM154B-002) 82262845-82283579 processed_transcript
ENST00000566205 (FAM154B-006) 82262810-82264889 protein_coding
ENST00000566861 (FAM154B-004) 82262826-82264889 protein_coding
ENST00000569120 (FAM154B-003) 82262818-82265748 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000XZ_0001ENSDARG00000006474ENSDART00000053860ENSDARG00000079672ENSDART00000113905ENSDARG00000082308ENSDART00000117142CIL_0000XZ_0002ENSG00000140598ENST00000268206ENST00000359445ENST00000557844ENST00000557939ENST00000558974ENST00000559429ENST00000560095ENST00000561331ENST00000561340ENST00000561389ENSG00000188659ENST00000339465ENST00000562097ENST00000565006ENST00000565432ENST00000565501ENST00000566205ENST00000566861ENST00000569120
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000XZ_0001ENSDARG00000006474ENSDART00000053860ENSDARG00000079672ENSDART00000113905ENSDARG00000082308ENSDART00000117142CIL_0000XZ_0002ENSG00000140598ENST00000268206ENST00000359445ENST00000561331ENSG00000188659ENST00000339465ENST00000562097ENST00000565006ENST00000565432ENST00000565501ENST00000566205ENST00000569120
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006474 ENSDART00000053860 N/A N/A N/A 0.578±0.24 N/A N/A 0.122±0.00 1.477±0.00 N/A N/A 0.389±0.00 N/A N/A N/A
ENSDARG00000079672 ENSDART00000113905 N/A N/A N/A 0.968±0.70 N/A N/A 0.913±0.19 0.699±0.27 1.300±0.00 N/A 1.184±0.00 N/A N/A N/A
ENSDARG00000082308 ENSDART00000117142 N/A N/A N/A 7.275±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140598 ENST00000268206 0.404±0.00 0.348±0.00 1.499±0.00 0.754±0.24 1.916±0.56 0.902±0.00 1.597±0.15 1.598±0.12 1.218±0.91 2.056±0.78 1.073±0.38 1.370±0.47 2.176±0.61 2.019±0.36
ENST00000359445 1.199±0.00 1.324±0.00 N/A 0.447±0.00 N/A 0.681±0.00 N/A N/A 0.389±0.00 0.638±0.00 0.585±0.00 2.428±0.00 1.695±0.00 1.379±0.54
ENST00000557844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561331 2.079±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188659 ENST00000339465 0.035±0.00 0.077±0.00 0.052±0.00 0.174±0.05 0.031±0.02 0.018±0.00 0.047±0.00 0.107±0.00 0.088±0.00 0.385±0.00 0.021±0.00 0.521±0.00 0.015±0.00 0.463±0.00
ENST00000562097 0.106±0.00 N/A N/A N/A 0.657±0.00 N/A 0.114±0.00 N/A N/A N/A 0.149±0.00 N/A N/A N/A
ENST00000565006 N/A N/A N/A N/A N/A 0.384±0.00 0.233±0.00 N/A N/A N/A N/A 0.479±0.00 0.232±0.00 N/A
ENST00000565432 N/A N/A N/A N/A 0.139±0.00 0.115±0.01 N/A N/A 0.052±0.00 N/A N/A 0.081±0.00 0.047±0.00 N/A
ENST00000565501 N/A 0.057±0.00 0.214±0.00 0.340±0.00 N/A 0.040±0.00 0.062±0.00 N/A N/A N/A N/A 0.168±0.08 N/A N/A
ENST00000566205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.792±0.15
ENST00000566861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569120 0.082±0.00 N/A N/A N/A N/A 0.175±0.00 0.441±0.00 0.277±0.00 0.136±0.00 N/A N/A N/A 0.314±0.00 3.362±0.00

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