C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00012L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102606-ENSG00000153495 CGP 9606 13:111114559-111344249
GeneTranscriptPositionBiotype
ENSG00000102606 (ARHGEF7)
Rho guanine nucleotide exchange factor (GEF) 7 		ENST00000218789 (ARHGEF7-001) 111153714-111305731 protein_coding
ENST00000317133 (ARHGEF7-008) 111114619-111293436 protein_coding
ENST00000375723 (ARHGEF7-005) 111205289-111295192 protein_coding
ENST00000375736 (ARHGEF7-007) 111153738-111305731 protein_coding
ENST00000375739 (ARHGEF7-201) 111115277-111295195 protein_coding
ENST00000375741 (ARHGEF7-202) 111115277-111295195 protein_coding
ENST00000422836 (ARHGEF7-017) 111115419-111116575 processed_transcript
ENST00000426073 (ARHGEF7-004) 111186854-111305737 protein_coding
ENST00000426768 (ARHGEF7-009) 111203060-111217885 protein_coding
ENST00000449979 (ARHGEF7-003) 111115428-111217880 protein_coding
ENST00000466143 (ARHGEF7-013) 111153689-111283226 protein_coding
ENST00000467053 (ARHGEF7-016) 111184938-111217865 protein_coding
ENST00000469877 (ARHGEF7-012) 111153689-111283298 nonsense_mediated_decay
ENST00000478679 (ARHGEF7-011) 111241220-111292458 protein_coding
ENST00000483189 (ARHGEF7-010) 111241145-111276031 processed_transcript
ENST00000483540 (ARHGEF7-014) 111114559-111153962 processed_transcript
ENST00000491688 (ARHGEF7-006) 111282828-111286236 processed_transcript
ENST00000491775 (ARHGEF7-015) 111153647-111217800 protein_coding
ENST00000544132 (ARHGEF7-018) 111275651-111281109 protein_coding
ENSG00000153495 (TEX29)
testis expressed 29 		ENST00000283547 (TEX29-002) 111320668-111344247 protein_coding
ENST00000497241 (TEX29-001) 111316184-111344249 nonsense_mediated_decay
ENSG00000227352 (ARHGEF7-AS1)
ARHGEF7 antisense RNA 1 		ENST00000435037 (ARHGEF7-AS1-001) 111144305-111144733 antisense
ENSG00000233644 (ARHGEF7-IT1)
ARHGEF7 intronic transcript 1 (non-protein coding) 		ENST00000423329 (ARHGEF7-IT1-001) 111122652-111144264 sense_intronic
ENSG00000274614 (RP11-17E4.1)
 ENST00000619088 (RP11-17E4.1-001) 111182111-111182692 unprocessed_pseudogene
CIL_00012L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031511-ENSMUSG00000031512 CGP 10090 8:11728105-11855761
GeneTranscriptPositionBiotype
ENSMUSG00000031512 (Tex29)
testis expressed 29 		ENSMUST00000033909 (Tex29-001) 11840474-11855761 protein_coding
ENSMUST00000132536 (Tex29-002) 11842061-11855757 processed_transcript
ENSMUST00000144007 (Tex29-003) 11840611-11844158 processed_transcript
ENSMUST00000166638 (Tex29-201) 11840919-11855705 protein_coding
ENSMUSG00000086500 (Gm15875)
predicted gene 15875 		ENSMUST00000152264 (Gm15875-001) 11838978-11840400 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00012L_0001ENSG00000102606ENST00000218789ENST00000317133ENST00000375723ENST00000375736ENST00000375739ENST00000375741ENST00000422836ENST00000426073ENST00000426768ENST00000449979ENST00000466143ENST00000467053ENST00000469877ENST00000478679ENST00000483189ENST00000483540ENST00000491688ENST00000491775ENST00000544132ENSG00000153495ENST00000283547ENST00000497241ENSG00000227352ENST00000435037ENSG00000233644ENST00000423329ENSG00000274614ENST00000619088CIL_00012L_0002ENSMUSG00000031512ENSMUST00000033909ENSMUST00000132536ENSMUST00000144007ENSMUST00000166638ENSMUSG00000086500ENSMUST00000152264
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00012L_0001ENSG00000102606ENST00000218789ENST00000375723ENST00000375736ENST00000375741ENST00000426073ENST00000466143ENSG00000153495ENST00000283547ENST00000497241ENSG00000227352ENST00000435037ENSG00000233644ENST00000423329ENSG00000274614ENST00000619088CIL_00012L_0002ENSMUSG00000031512ENSMUST00000033909ENSMUST00000132536ENSMUST00000144007ENSMUST00000166638ENSMUSG00000086500ENSMUST00000152264
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102606 ENST00000218789 N/A N/A N/A 6.709±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000317133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000375723 N/A N/A N/A 5.138±2.23 1.352±0.00 0.728±0.00 N/A N/A 1.025±0.00 N/A N/A 1.335±0.00 N/A 3.166±0.00
ENST00000375736 12.472±0.00 4.092±0.00 1.709±0.00 N/A 6.899±4.34 3.681±2.94 2.989±2.55 7.249±0.00 1.320±0.09 3.233±0.86 7.016±0.00 8.250±4.25 8.567±0.00 7.897±2.85
ENST00000375739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000375741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.491±0.00
ENST00000422836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426073 N/A N/A N/A 3.027±0.00 N/A N/A N/A N/A N/A 1.032±0.00 N/A N/A N/A N/A
ENST00000426768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466143 N/A N/A N/A N/A N/A N/A 1.515±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000467053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153495 ENST00000283547 0.258±0.00 0.112±0.00 N/A 0.856±0.28 N/A 0.215±0.00 0.052±0.00 0.138±0.00 0.131±0.00 N/A N/A 0.310±0.11 0.205±0.01 24.531±4.61
ENST00000497241 N/A N/A N/A N/A 0.201±0.00 N/A N/A 0.155±0.00 N/A 0.389±0.00 N/A N/A N/A N/A
ENSG00000227352 ENST00000435037 0.168±0.00 N/A 0.735±0.00 0.045±0.00 0.043±0.00 0.500±0.00 N/A N/A N/A 1.197±0.00 N/A N/A N/A 2.002±0.00
ENSG00000233644 ENST00000423329 0.048±0.00 0.095±0.00 N/A 0.103±0.02 0.216±0.00 0.191±0.13 0.043±0.00 N/A 0.242±0.00 N/A N/A N/A 0.090±0.02 2.025±0.00
ENSG00000274614 ENST00000619088 N/A 0.153±0.00 0.176±0.00 0.043±0.00 0.277±0.24 N/A 0.217±0.00 0.280±0.00 0.176±0.00 0.187±0.00 0.366±0.00 0.045±0.00 N/A 0.074±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031512 ENSMUST00000033909 N/A N/A N/A N/A 0.158±0.00 N/A 0.078±0.04 0.068±0.03 N/A N/A N/A N/A N/A 70.126±27.92
ENSMUST00000132536 N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 0.016±0.00 N/A N/A 0.209±0.04 0.122±0.01 N/A
ENSMUST00000144007 N/A N/A 0.030±0.00 N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166638 N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A 0.326±0.00 N/A 159.118±0.00
ENSMUSG00000086500 ENSMUST00000152264 N/A N/A N/A 0.186±0.00 N/A N/A N/A N/A N/A N/A N/A 0.293±0.00 N/A 6.265±1.02

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