C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00015I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056034-ENSDARG00000056566 CGP 7955 19:32650084-32768075
GeneTranscriptPositionBiotype
ENSDARG00000056034 (tmem55a)
transmembrane protein 55A
ENSDART00000078459 (tmem55a-001) 32650084-32676425 protein_coding
ENSDARG00000056566 (necab1)
N-terminal EF-hand calcium binding protein 1
ENSDART00000035049 (necab1-001) 32683087-32768075 protein_coding
ENSDART00000114117 (necab1-201) 32683089-32768023 protein_coding
CIL_00015I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028221-ENSMUSG00000040536 CGP 10090 4:14864076-15149794
GeneTranscriptPositionBiotype
ENSMUSG00000028221 (Tmem55a)
transmembrane protein 55A
ENSMUST00000029875 (Tmem55a-001) 14864076-14915176 protein_coding
ENSMUSG00000040536 (Necab1)
N-terminal EF-hand calcium binding protein 1
ENSMUST00000041606 (Necab1-001) 14952245-15149131 protein_coding
ENSMUST00000108273 (Necab1-002) 14954929-15149794 protein_coding
ENSMUST00000141105 (Necab1-003) 15110962-15148961 processed_transcript
ENSMUSG00000086587 (Gm11837)
predicted gene 11837
ENSMUST00000136992 (Gm11837-001) 14930661-14953030 antisense
ENSMUST00000137532 (Gm11837-003) 14929908-14952893 antisense
ENSMUST00000152024 (Gm11837-002) 14930676-14952905 antisense
ENSMUSG00000087241 (Gm11844)
predicted gene 11844
ENSMUST00000129207 (Gm11844-001) 15022582-15031987 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015I_0001ENSDARG00000056034ENSDART00000078459ENSDARG00000056566ENSDART00000035049ENSDART00000114117CIL_00015I_0002ENSMUSG00000028221ENSMUST00000029875ENSMUSG00000040536ENSMUST00000041606ENSMUST00000108273ENSMUST00000141105ENSMUSG00000086587ENSMUST00000136992ENSMUST00000137532ENSMUST00000152024ENSMUSG00000087241ENSMUST00000129207
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015I_0001ENSDARG00000056034ENSDART00000078459ENSDARG00000056566ENSDART00000035049ENSDART00000114117CIL_00015I_0002ENSMUSG00000028221ENSMUST00000029875ENSMUSG00000040536ENSMUST00000041606ENSMUST00000108273ENSMUSG00000086587ENSMUST00000136992ENSMUST00000137532ENSMUST00000152024ENSMUSG00000087241ENSMUST00000129207
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056034 ENSDART00000078459 N/A N/A N/A 2.473±0.00 N/A N/A 1.285±0.00 N/A 0.280±0.00 N/A 1.439±0.00 N/A N/A N/A
ENSDARG00000056566 ENSDART00000035049 N/A N/A N/A 12.393±7.22 N/A N/A 2.288±1.43 0.077±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000114117 N/A N/A N/A 14.244±0.57 N/A N/A 0.329±0.37 0.077±0.00 0.027±0.00 N/A 0.640±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028221 ENSMUST00000029875 13.136±3.20 30.753±2.84 17.057±3.74 13.536±6.45 12.340±3.61 14.322±1.74 9.470±1.57 16.845±2.07 9.168±3.43 15.336±2.59 6.796±0.61 18.897±7.05 8.697±6.55 1.511±0.79
ENSMUSG00000040536 ENSMUST00000041606 0.063±0.02 0.457±0.30 1.067±0.05 2.137±0.73 0.035±0.01 0.028±0.00 0.183±0.05 0.161±0.00 2.961±2.10 0.052±0.04 0.029±0.01 0.233±0.14 0.031±0.02 N/A
ENSMUST00000108273 N/A N/A N/A N/A 0.009±0.00 0.110±0.01 N/A N/A 2.009±0.71 N/A N/A 0.247±0.00 0.030±0.00 N/A
ENSMUST00000141105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086587 ENSMUST00000136992 2.079±1.52 0.854±0.60 0.989±0.00 N/A 1.145±0.21 0.381±0.13 0.599±0.32 6.035±0.73 N/A 0.761±0.38 N/A 0.527±0.29 0.219±0.09 196.014±50.08
ENSMUST00000137532 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.699±0.00 N/A N/A N/A N/A
ENSMUST00000152024 N/A N/A N/A N/A 0.652±0.17 0.168±0.00 N/A N/A N/A 0.260±0.00 0.206±0.09 0.974±0.25 0.126±0.05 40.482±0.00
ENSMUSG00000087241 ENSMUST00000129207 N/A N/A 0.053±0.00 N/A N/A N/A N/A 0.882±0.14 1.623±1.19 N/A N/A N/A N/A 0.210±0.12

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