C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-terminal EF-hand calcium binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041606 Necab1-001 ENSMUSG00000040536 10090 - 4:14952245-15149131 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000041606
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000041606 0.063±0.02 0.457±0.30 1.067±0.05 2.137±0.73 0.035±0.01 0.028±0.00 0.183±0.05 0.161±0.00 2.961±2.10 0.052±0.04 0.029±0.01 0.233±0.14 0.031±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00015I CIL_00015I_0002 CGP 4:14864076-15149794
CIL_00015H CIL_00015H_0002 CGP 4:14952245-15286753

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000417640 NECAB1-001 protein_coding Homo_sapiens 0 1478
ENST00000517562 C8orf88-001 protein_coding Homo_sapiens 0 409
ENST00000521954 NECAB1-006 processed_transcript Homo_sapiens 0 496
ENST00000522729 NECAB1-004 retained_intron Homo_sapiens 0 324
ENST00000523962 NECAB1-005 retained_intron Homo_sapiens 0 350

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