C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00015U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045413-ENSDARG00000079190 CGP 7955 24:8627838-8657203
GeneTranscriptPositionBiotype
ENSDARG00000045413 (gcm2)
glial cells missing homolog 2 (Drosophila)
ENSDART00000066780 (gcm2-001) 8627838-8632101 protein_coding
ENSDART00000143501 (gcm2-002) 8627838-8632147 protein_coding
ENSDARG00000079190 (sycp2l)
synaptonemal complex protein 2-like
ENSDART00000114810 (sycp2l-201) 8642973-8657203 protein_coding
CIL_00015U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124827-ENSG00000153157 CGP 9606 6:10873223-10979320
GeneTranscriptPositionBiotype
ENSG00000124827 (GCM2)
glial cells missing homolog 2 (Drosophila)
ENST00000379491 (GCM2-001) 10873223-10881941 protein_coding
ENSG00000235051 (RP11-637O19.2)
ENST00000436249 (RP11-637O19.2-001) 10881780-10884349 antisense
ENSG00000272162 (RP11-637O19.3)
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000417929}
ENST00000480294 (RP11-637O19.3-001) 10747794-10930423 nonsense_mediated_decay
CIL_00015U_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021362-ENSMUSG00000038651 CGP 10090 13:41101427-41171684
GeneTranscriptPositionBiotype
ENSMUSG00000021362 (Gcm2)
glial cells missing homolog 2 (Drosophila)
ENSMUST00000021791 (Gcm2-201) 41101427-41109988 protein_coding
ENSMUSG00000038651 (Sycp2l)
synaptonemal complex protein 2-like
ENSMUST00000124093 (Sycp2l-001) 41114307-41146658 protein_coding
ENSMUST00000141292 (Sycp2l-002) 41148796-41171562 protein_coding
ENSMUST00000145810 (Sycp2l-003) 41153388-41171684 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015U_0001ENSDARG00000045413ENSDART00000066780ENSDART00000143501ENSDARG00000079190ENSDART00000114810CIL_00015U_0002ENSG00000124827ENST00000379491ENSG00000235051ENST00000436249ENSG00000272162ENST00000480294CIL_00015U_0003ENSMUSG00000021362ENSMUST00000021791ENSMUSG00000038651ENSMUST00000124093ENSMUST00000141292ENSMUST00000145810
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015U_0001ENSDARG00000045413ENSDART00000066780ENSDART00000143501ENSDARG00000079190ENSDART00000114810CIL_00015U_0002ENSG00000124827ENST00000379491ENSG00000235051ENST00000436249ENSG00000272162ENST00000480294CIL_00015U_0003ENSMUSG00000021362ENSMUST00000021791ENSMUSG00000038651ENSMUST00000124093ENSMUST00000141292ENSMUST00000145810
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045413 ENSDART00000066780 N/A N/A N/A 0.079±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143501 N/A N/A N/A 0.054±0.02 N/A N/A 0.026±0.00 0.808±0.36 N/A N/A N/A N/A N/A N/A
ENSDARG00000079190 ENSDART00000114810 N/A N/A N/A 0.370±0.00 N/A N/A 0.124±0.07 3.629±0.35 0.255±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124827 ENST00000379491 N/A N/A N/A 0.043±0.01 0.069±0.00 0.127±0.00 N/A N/A 0.116±0.00 N/A N/A 0.005±0.00 N/A 0.338±0.20
ENSG00000235051 ENST00000436249 0.117±0.00 0.547±0.00 N/A 0.174±0.09 0.470±0.00 0.127±0.00 0.166±0.00 N/A N/A 0.177±0.00 0.076±0.00 0.082±0.02 N/A 0.159±0.00
ENSG00000272162 ENST00000480294 N/A N/A N/A N/A N/A N/A N/A N/A 0.673±0.00 1.817±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021362 ENSMUST00000021791 N/A N/A 0.005±0.00 0.002±0.00 0.035±0.02 N/A N/A N/A 0.004±0.00 0.023±0.01 N/A 0.149±0.07 0.080±0.08 0.022±0.01
ENSMUSG00000038651 ENSMUST00000124093 N/A N/A N/A 0.032±0.02 N/A N/A N/A N/A 0.017±0.01 N/A N/A 0.314±0.16 0.013±0.01 N/A
ENSMUST00000141292 N/A N/A N/A 0.151±0.14 N/A N/A 0.076±0.03 N/A 0.025±0.00 N/A N/A 0.691±0.33 0.008±0.00 0.078±0.03
ENSMUST00000145810 N/A N/A 0.015±0.00 0.370±0.00 N/A N/A N/A N/A 0.027±0.00 N/A N/A 0.275±0.02 0.060±0.03 0.196±0.14

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