C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glial cells missing homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021791 Gcm2-201 ENSMUSG00000021362 10090 - 13:41101427-41109988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverLungOvaryPlacentaTestisENSMUST00000021791
Transcript ID Bladder Brain Breast Liver Lung Ovary Placenta Testis
ENSMUST00000021791 0.005±0.00 0.002±0.00 0.035±0.02 0.004±0.00 0.023±0.01 0.149±0.07 0.080±0.08 0.022±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00015X CIL_00015X_0003 CGP 13:41025120-41109988
CIL_00015U CIL_00015U_0003 CGP 13:41101427-41171684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 ISA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006874 ISS cellular calcium ion homeostasis
GO:0030154 IMP cell differentiation
GO:0030643 ISS cellular phosphate ion homeostasis
GO:0043066 IMP negative regulation of apoptotic process
GO:0043565 ISS sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0060017 ISS parathyroid gland development
GO:0071310 IDA cellular response to organic substance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379491 GCM2-001 protein_coding Homo_sapiens 0 959

Loading