C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glial cells missing homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379491 GCM2-001 ENSG00000124827 9606 - 6:10873223-10881941 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverOvaryTestisENST00000379491
Transcript ID Brain Breast Colon Liver Ovary Testis
ENST00000379491 0.043±0.01 0.069±0.00 0.127±0.00 0.116±0.00 0.005±0.00 0.338±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00015X CIL_00015X_0002 CGP 6:10762723-10881941
CIL_00015U CIL_00015U_0002 CGP 6:10873223-10979320

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 TAS:IEA DNA binding
GO:0005634 NAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006874 IMP cellular calcium ion homeostasis
GO:0007275 NAS multicellular organismal development
GO:0030154 IEA cell differentiation
GO:0030643 IMP cellular phosphate ion homeostasis
GO:0043066 IEA negative regulation of apoptotic process
GO:0043565 IDA sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0060017 IMP parathyroid gland development
GO:0071310 IEA cellular response to organic substance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021791 Gcm2-201 protein_coding Mus_musculus 0 959
ENSMUST00000024104 Gcm1-201 protein_coding Mus_musculus 6e-29 134

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