C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00015Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071774-ENSDARG00000045437 CGP 7955 24:8139391-8307832
GeneTranscriptPositionBiotype
ENSDARG00000045437 (slc35b3)
solute carrier family 35, member B3 		ENSDART00000149025 (slc35b3-002) 8288604-8305014 protein_coding
ENSDART00000149662 (slc35b3-003) 8301953-8304947 protein_coding
ENSDART00000150055 (slc35b3-001) 8288596-8307832 protein_coding
ENSDARG00000071774 (eef1e1)
eukaryotic translation elongation factor 1 epsilon 1 		ENSDART00000106388 (eef1e1-001) 8139391-8157092 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00015Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124802-ENSG00000124786 CGP 9606 6:8073360-8435483
GeneTranscriptPositionBiotype
ENSG00000124786 (SLC35B3)
solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 		ENST00000379660 (SLC35B3-001) 8413068-8435483 protein_coding
ENSG00000124802 (EEF1E1)
eukaryotic translation elongation factor 1 epsilon 1 		ENST00000379715 (EEF1E1-002) 8079395-8102578 protein_coding
ENST00000429723 (EEF1E1-004) 8073360-8102548 protein_coding
ENST00000488226 (EEF1E1-001) 8097307-8102046 protein_coding
ENST00000502429 (EEF1E1-005) 8078494-8102481 protein_coding
ENST00000507463 (EEF1E1-003) 8089954-8102559 protein_coding
ENST00000515633 (EEF1E1-006) 8089985-8097311 protein_coding
ENSG00000232234 (RP11-203H2.1)
 ENST00000439891 (RP11-203H2.1-001) 8329655-8342455 lincRNA
ENSG00000234763 (RP11-203H2.2)
 ENST00000415575 (RP11-203H2.2-001) 8341937-8343021 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00015Y_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001707-ENSMUSG00000021432 CGP 10090 13:38645698-38960875
GeneTranscriptPositionBiotype
ENSMUSG00000001707 (Eef1e1)
eukaryotic translation elongation factor 1 epsilon 1 		ENSMUST00000001757 (Eef1e1-201) 38645698-38659028 protein_coding
ENSMUSG00000021432 (Slc35b3)
solute carrier family 35, member B3 		ENSMUST00000021870 (Slc35b3-201) 38932140-38960875 protein_coding
ENSMUST00000167513 (Slc35b3-202) 38932140-38960537 protein_coding
ENSMUSG00000087909 (Gm22035)
predicted gene, 22035 		ENSMUST00000157284 (Gm22035-201) 38898360-38898587 misc_RNA
ENSMUSG00000096932 (5033403F01Rik)
RIKEN cDNA 5033403F01 gene 		ENSMUST00000181376 (5033403F01Rik-201) 38960619-38966299 lincRNA
ENSMUSG00000097151 (Gm26514)
predicted gene, 26514 		ENSMUST00000181087 (Gm26514-201) 38945543-38951313 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015Y_0001ENSDARG00000045437ENSDART00000149025ENSDART00000149662ENSDART00000150055ENSDARG00000071774ENSDART00000106388CIL_00015Y_0002ENSG00000124786ENST00000379660ENSG00000124802ENST00000379715ENST00000429723ENST00000488226ENST00000502429ENST00000507463ENST00000515633ENSG00000232234ENST00000439891ENSG00000234763ENST00000415575CIL_00015Y_0003ENSMUSG00000001707ENSMUST00000001757ENSMUSG00000021432ENSMUST00000021870ENSMUST00000167513ENSMUSG00000087909ENSMUST00000157284ENSMUSG00000096932ENSMUST00000181376ENSMUSG00000097151ENSMUST00000181087
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015Y_0001ENSDARG00000045437ENSDART00000149025ENSDART00000150055ENSDARG00000071774ENSDART00000106388CIL_00015Y_0002ENSG00000124786ENST00000379660ENSG00000124802ENST00000379715ENSG00000232234ENST00000439891ENSG00000234763ENST00000415575CIL_00015Y_0003ENSMUSG00000001707ENSMUST00000001757ENSMUSG00000021432ENSMUST00000021870ENSMUST00000167513ENSMUSG00000087909ENSMUST00000157284ENSMUSG00000096932ENSMUST00000181376ENSMUSG00000097151ENSMUST00000181087
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045437 ENSDART00000149025 N/A N/A N/A 2.494±1.61 N/A N/A 1.436±0.06 3.115±0.00 0.712±0.00 N/A 0.499±0.00 N/A N/A N/A
ENSDART00000149662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150055 N/A N/A N/A 1.762±0.34 N/A N/A 1.618±0.00 0.731±0.65 0.257±0.00 N/A 0.396±0.00 N/A N/A N/A
ENSDARG00000071774 ENSDART00000106388 N/A N/A N/A 19.778±3.79 N/A N/A 5.458±1.51 3.677±0.10 0.513±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124786 ENST00000379660 4.561±0.00 3.628±0.00 N/A 2.295±0.00 4.595±3.17 5.015±0.00 2.266±0.00 4.842±2.19 2.978±2.27 4.386±0.00 0.680±0.30 3.564±2.02 2.535±0.37 5.298±2.01
ENSG00000124802 ENST00000379715 N/A N/A N/A 8.286±3.20 N/A N/A N/A 19.294±0.00 N/A N/A N/A N/A N/A 19.736±4.46
ENST00000429723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232234 ENST00000439891 N/A N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A N/A 0.103±0.04 0.096±0.04
ENSG00000234763 ENST00000415575 0.053±0.00 N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A 0.068±0.00 0.112±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001707 ENSMUST00000001757 7.012±0.58 2.839±0.28 7.918±1.68 17.730±10.38 5.362±2.35 3.968±1.05 5.037±0.40 6.974±0.50 16.870±13.71 4.070±0.52 7.571±0.73 6.943±2.17 19.466±8.89 4.140±1.49
ENSMUSG00000021432 ENSMUST00000021870 N/A 1.812±0.00 N/A N/A N/A N/A N/A 1.159±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000167513 2.276±0.46 1.670±0.97 2.885±0.08 3.315±0.55 4.226±2.07 1.654±0.00 0.691±0.38 3.710±2.02 2.295±0.96 1.841±0.51 0.445±0.11 3.081±1.68 8.485±3.05 2.441±0.78
ENSMUSG00000087909 ENSMUST00000157284 N/A N/A N/A 0.703±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000096932 ENSMUST00000181376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.665±0.00
ENSMUSG00000097151 ENSMUST00000181087 0.605±0.21 0.667±0.31 0.323±0.04 0.390±0.24 0.822±0.31 0.965±0.39 0.353±0.06 0.381±0.09 0.341±0.16 1.102±0.38 0.028±0.01 1.430±0.97 0.240±0.19 0.312±0.12

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